Lactuca sativa (garden lettuce): 111890502
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Entry
111890502 CDS
T05352
Name
(RefSeq) nuclear pore complex protein NUP98A
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
111890502
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lsv03019
]
111890502
03036 Chromosome and associated proteins [BR:
lsv03036
]
111890502
Messenger RNA biogenesis [BR:
lsv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
111890502
Chromosome and associated proteins [BR:
lsv03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
111890502
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin2
Nup98_GLEBS
Motif
Other DBs
NCBI-GeneID:
111890502
NCBI-ProteinID:
XP_023742377
LinkDB
All DBs
Position
6:144174566..144180104
Genome browser
AA seq
1016 aa
AA seq
DB search
MFGASNPFGQSSNSPFGSPSVFGQNNNANNNPFAPKPFGSTSPFGAQTGGSIFGGTSTGV
FGTQASSPVFGASSSPAFGSSMPSFGASSTPAFGASSSAFGGSSVFGQKPAFGGFGSTTP
TQPAFGSSFGAPSQPAFGTNLFGSTAFGAPSQPAFGTPSTPTFGTSTTPAFGATSTPAFG
ATSAPAFGSTSTPAFGSTGSAFGSSPFGASSTPTFGQSSTPAFGQSSTPAFGQSSTPAFG
QSSTPAFGQSSTPAFGATSSPFSFGSSPAFGQSTSAFGSSPFGTATSAFGAQSSPFGGQT
TTPAFGSPGFGQTSFGGQRGGSRVTPYAQTPEADSGSGTQPAGKLESISAMPAYKDKSHE
ELRWEDYQQGDKGGPNPAGQTSGGMGFNTTNTTTQSNPFSSSPAFTQLNTNPFSSTTPSN
PFAPKTSTFSTPGFGNSTPTLGSSPFGATSSNPFGSTPSPTPSVFGSTPGFGSTTSASPF
GAPSTSTFGTSTSIFGATQAQGATPSFGGGLNFGNTQSSPLFQSTTPSLGQTSSPFGQTT
SAFGQSAPSFGQSAPAFGQSNAFGGNLFSSTPASSSMGFNQTTPSLSMPFQSAQPTQNTG
GFGFGAPAGGIGGTSSIFGQNNFGQMSASQTPAVAQPQSITNPFGTLPAMPQMSIGRVGN
APSIQYGISSLPVVDKPAPIRISSVLTSRHLSQRRVRLPARKYHPKNDGPKVSFFSDDEE
TTSTPKADALFIPRENPRALVIRPLEQWPGKSSAEKLKNASSPAQTNGEYTGFASSPPLN
GRSTDNGNRNHSENGTLKEQTPIKTPQKQNGIHHLHDDHSPPKSDSYISLTGHRAGEAAI
VYEHGADIEALMPKLRHSDYYTEPRIQELAAKERAEPGFCRRVHNFTVGRHNYGSIKFLG
ETDVRRLELESLIQFNHREVIVYMDETKKPPIGQGLNKPAEVTLLNIKCFDKKTGKHFTE
GPRIEKYKEMLKKKAEDQGAEFVEYDTVKGEWKFRVKHFSKYGLHDDDDDDVGVCF
NT seq
3051 nt
NT seq
+upstream
nt +downstream
nt
atgtttggtgctagcaacccattcgggcagtcatccaatagtccctttgggtccccatca
gtttttgggcagaacaataatgcaaataacaacccatttgctccaaaaccatttggtagc
acatctccctttggtgcacaaacaggtggttctatttttggtggcacttctactggtgtc
tttggtacccaagcttcttcaccagtttttggtgcttcttcttcacctgctttcggtagt
tcaatgccttcttttggagcttcttcaactccagcctttggtgcttcatcttcagctttt
ggtggttcttccgtattcggacaaaaacccgcattcggtggcttcggatccacaacacca
acacaacccgcattcggaagctcatttggagctccaagtcaacccgcatttggaaccaat
ctattcgggtcaacagcattcggagctccaagtcaacctgcttttggcactccaagcacc
ccaacattcgggacctcaaccacccctgccttcggtgccacatctacccccgccttcggt
gccacatcagcacccgccttcgggtccacatctacccctgcatttgggtccacagggtct
gcatttggtagctccccttttggtgcatctagcacacccacttttggtcaatccagcacc
ccggcttttggtcaatcctccacaccagcttttggtcaatcgagcacaccggcttttggt
caatcaagtaccccggcttttggccaatcgagtacacccgcttttggtgccactagctcc
ccttttagtttcgggtcaagtcctgcatttggtcagtccacgtcagcatttggcagcagc
ccgtttggcactgccacgtcagcttttggagctcagagttctcccttcggtggtcagacg
acaacaccagcatttgggagtccgggttttggtcaaacatcatttggtggtcaacgtggt
ggaagtagagtaactccttatgctcaaacacctgaagcagacagtggtagtgggacccag
cctgctgggaagcttgagtccatttcagcaatgcctgcatacaaagacaaaagtcatgaa
gaacttagatgggaagattatcaacaaggagataaagggggtccaaatcctgcaggtcaa
acctctggtggaatgggattcaacaccaccaacaccaccacacaatcaaaccctttttct
tcttctccagcatttacccaattaaacacaaatccattttcttccactacaccttcaaac
ccattcgccccaaaaacttcaactttctcaacccccggattcggtaattccactcctaca
ctcggctcttcacccttcggtgccacatcatcaaacccatttgggtcaacaccatcacca
actccatcggtatttgggtcaactcccgggttcggatccactacttccgcttcccctttc
ggtgctccaagtacatcaacttttggcacatcaacttctatttttggtgcaactcaagct
caaggggcaactccgtcatttggtggtggattaaactttggcaacacgcaatcctctccc
ttgttccagtcaaccacaccgtctcttggtcaaacaagctctccctttgggcagaccacc
tcggctttcgggcagtctgccccgtcgttcgggcagagtgctccggctttcggtcaatca
aatgcatttggtgggaacttgttctcaagcaccccggcatcaagcagcatggggtttaat
cagacaactccttccctttcaatgccatttcaatcggctcaaccaactcagaatacaggt
ggttttggctttggggcgccagcaggtggcattggtgggacatcaagcatttttggtcag
aataattttggacaaatgtcagcaagtcaaactcctgcagttgcacaaccacagtctatt
acaaatccctttggaactctaccagcaatgcctcaaatgtcaattgggcgtgtgggaaat
gcaccttcaattcaatatggaatttccagcttaccagttgttgataaacctgctcccatt
aggatttcatccgtgttgacttctcgccatctttctcaaaggcgagttaggttgcctgct
agaaagtatcacccgaaaaacgacgggccaaaggtttcgttttttagtgatgatgaagag
actaccagtacaccaaaagcagatgctctttttattccaagggagaatccaagagctttg
gttattcgccctcttgaacaatggcctggcaaatcatctgctgaaaaattaaaaaacgca
tcttctccagcacaaacaaacggtgaatacaccgggtttgcttcttcccctcctttaaat
ggtcgctctacagataacgggaacagaaaccattccgaaaacggaaccctaaaggaacaa
acaccaatcaaaaccccccaaaaacaaaacggaatccaccacctccacgacgaccactcc
ccgccaaaatctgactcctacatctccctaactggtcatcgagcgggagaagccgcaatc
gtatacgaacacggcgccgacatcgaagctctgatgccgaaactccgccactccgattac
tacaccgaaccccgaatccaagaactcgccgccaaagaacgcgccgaacccggcttctgc
cgccgcgtccacaacttcacagttggccgccacaactacggctccattaaattccttggg
gaaactgacgtccgaaggctggaattggaatcgctgattcaattcaatcatcgcgaagtg
attgtctacatggatgaaacgaaaaagccgccgatcggacaagggctgaataagccggct
gaagtcacacttttgaatataaaatgttttgataagaaaacgggaaagcattttactgaa
ggcccgaggattgagaagtataaggagatgttgaagaagaaagcggaggatcaaggggcg
gagtttgtggagtatgatacggttaaaggggagtggaagtttagggttaaacattttagc
aagtatgggcttcatgatgatgatgatgatgatgttggagtttgtttttga
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