Lactuca sativa (garden lettuce): 111890586
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Entry
111890586 CDS
T05352
Name
(RefSeq) myosin-12
KO
K10357
myosin V
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
111890586
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lsv03019
]
111890586
04131 Membrane trafficking [BR:
lsv04131
]
111890586
03029 Mitochondrial biogenesis [BR:
lsv03029
]
111890586
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
lsv04812
]
111890586
Messenger RNA biogenesis [BR:
lsv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
111890586
mRNA cycle factors
P-body specific factors
111890586
Membrane trafficking [BR:
lsv04131
]
Others
Actin-binding proteins
Myosins
111890586
Mitochondrial biogenesis [BR:
lsv03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
111890586
Cytoskeleton proteins [BR:
lsv04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
111890586
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
Myosin_N
Hpr_kinase_C
AAA_22
Zeta_toxin
AAA_16
TSC22
nSTAND3
Motif
Other DBs
NCBI-GeneID:
111890586
NCBI-ProteinID:
XP_023742461
LinkDB
All DBs
Position
7:complement(47501169..47512662)
Genome browser
AA seq
1562 aa
AA seq
DB search
MGTPVNIIVGSHVWVEDPEIAWIDGEVLDIKGSNATIVTTNGKTIKANISNIYPKDTEAP
PAGVDDMTKLAYLHEPGVLYNLAARFALNEIYTYTGNILIAVNPFRRLPHLYDVHMMEQY
KGATFGELSPHLFAIADDCYRAMINENGSQSILVSGESGAGKTETTKMLMRYLAFMGGRS
GTEGRTVEQQVLESNPVLEAFGNAKTVKNNNSSRFGKFVEIQFDKQGKISGAAVRTYLLE
RSRVCQVSDPERNYHCFYMLCAAPPEDAKKFKLGDPRSFHYLNQTNCYEVANIDDGREYL
ETRSAMDVVGINNDEQDAIFRVVAAILHLGNVDFIKGKEFDSSKVKDEKSLYHLRTAAEL
LMCDEKALEQSLCERVIVTPDGNITKPLDPAAAALSRDALAKTVYSRLFDWIVDKINNSI
GQDPTAKSIIGVLDIYGFESFKINSFEQLCINLTNEKLQQHFNQHVFKMEQEEYTKEEIN
WSYVEFVDNQDVLDLIEKKPGGIIALLDEACMFPKATHETFAQKMYQTYKSHKRFAKPKL
SRTNFTINHYAGDVTYQADHFLDKNKDYVVAEFQALLNDSNCPFVANLFPPLEDSSKQSK
FSSIGTRFKQQLQSLMETLSTTEPHYIRCVKPNTVLKPGIFENDNVLSQLRCGGVLEAIR
ISCAGYPTKRSFDEFLERFGMLAPDVLDGSDEKSACVAICDRFGLKGYQIGKSKVFLRAG
QMAELDARRAEVLATAARRIQRQIRTYLTRKEFIVLKKATINTQKNWRARLARMLYEYLR
KEAASIRIQKHIRGGIARASYKHLQGASVSIQTGLRAMAARDEFRRRRRNKAATIVQTEW
RRFHACSEYKKKQKATLTLQCLWRSKVARKELRMLKLAARDAGALREAKDKLEKRVEELT
WRLDFEKHLRVDLEEAKGVEITKLQNALQEMQGKLEEAHNQIVHEKEAAKIAIEQAPPVI
KEVPVVDNTKLEELTDQNHKLEDEILEFKKRVEEFEKKFNEVDNESKNRLKELEESQAKI
SGLQETIERLDANLSNLESENQVLRQEALVASTNEDLTEETENLKSKIKELESENEFLRN
QKVVVVEQITTPEKVSPQLQSLNNGHEKNDDFETPHVEQEKTKELENTPYSSLTKQKSLT
DRQQENHDVLIKCLLEDKRFDKTRPVAACIVYKTLVQWRSFEAEKTHIFDRIIHTIRSSI
ETQDNIKDLAYWLSTTSTLLFLLQSTIKASGSPYKSPHRNRASPTTLFGRMTQGFRTSPM
GMGISSGYSGMEGKPSAQSKIEAKYPALLFKQHLTACVEKLYGMIRDSLKKEISPFLNSC
IQAPRSTRVRPTRGASRNILSNIVAKQQASIIHWQSIVNSLDNTLGILSENYVPSIITRK
IFSQVFSFIDVQFFNSLLLRRECCSFSNGEYVKSGLHELEQWCKKATDQFAGSSWDELRH
IRQAVGLLVSHQKTQKSMEEITNELCSVLSVPQIYRIGTMFWDDKYGTQGLSQEVIGKMR
SLMAEDSVSMPNNSFLLDVDSSIPFSLEEISQSFLDIDLSEIDPPPLLRQRSDFHFLLQQ
IE
NT seq
4689 nt
NT seq
+upstream
nt +downstream
nt
atgggaactccggtgaatattatcgtcggatcacatgtttgggttgaagatcctgaaatt
gcatggattgatggagaggttttagatatcaaaggaagcaatgctacgatagttaccaca
aatggaaaaactataaaagcaaatatatcgaatatatatccaaaggatacggaagcacca
ccagctggagttgatgacatgactaagttagcttaccttcatgagcctggagtgctttac
aaccttgctgcccgatttgccctcaatgaaatatacacgtacactgggaacatattaata
gcagtaaatccgtttcgaagattaccacatttgtatgatgttcacatgatggagcaatat
aaaggggccacttttggagagttgagtccacatctttttgctattgctgatgactgctac
agggcaatgatcaatgaaaatggaagtcagtcgatattggtgagtggggagagtggagca
ggaaaaactgagacaacaaaaatgttgatgagataccttgctttcatgggaggcagatca
ggtacagaaggaagaacagttgaacaacaagttctcgagtcaaatccagttcttgaagcc
tttgggaatgccaaaactgtgaagaacaacaattcaagtcgttttggtaaatttgtagag
atccaattcgataagcaaggaaagatatcaggggctgcagtccgaacttatcttctagaa
agatcacgtgtttgccaagtatctgatcccgagaggaattaccattgcttttacatgctt
tgtgcagcaccccctgaggatgcgaagaagtttaaactaggagatccaagatcgtttcat
tatttgaatcaaacaaattgctatgaagtagcaaatattgatgatggaagagaatatttg
gaaacacgaagtgctatggatgttgtgggaatcaacaatgatgaacaggatgcaatattt
cgtgttgtagctgcaattcttcatcttggaaatgttgactttatcaaggggaaagaattt
gactcttcaaaagtcaaagatgaaaagtcactctatcatcttcgtacagcagcagagcta
ctaatgtgtgacgaaaaagcccttgagcaatcattatgtgagcgtgttattgtaacccca
gatggaaatatcacaaaaccattagatccagcagcagctgctttgagtcgtgatgcccta
gcaaaaacagtctactccagactctttgactggattgtggacaaaataaacaattcaatt
ggtcaggatcctactgcaaaaagcataattggagtccttgatatatatggctttgaaagc
ttcaagattaacagttttgaacagttatgcattaacctaacaaatgaaaagctgcaacag
cattttaatcagcatgtgttcaagatggagcaagaagaatacacaaaggaggaaatcaac
tggagctatgtagaatttgtggacaatcaagatgttttagatctaattgaaaagaaacct
gggggcatcattgctcttcttgatgaagcatgtatgtttcctaaggcaacacatgagaca
tttgctcaaaagatgtatcagacatataaatcacacaaacggtttgcaaagccaaaactt
tctagaacaaatttcacaatcaatcattatgcaggagatgttacctatcaagctgatcac
tttctggacaagaacaaggattatgttgtagcagagtttcaagctttgttaaatgactca
aactgcccctttgtagcaaatctcttcccaccattagaggattcatctaaacaatccaag
ttttcctccataggaactcgctttaagcaacaactacaatcattaatggaaaccttgagc
acaacagagccacattacatcagatgtgtaaagcctaatacggttttgaagccaggaata
tttgaaaatgacaatgttttgagtcagttaagatgtgggggtgttctggaggcaattaga
ataagttgtgctgggtatccaacaaaaagatcttttgatgaattcctagaaagatttggg
atgttggctccagatgttcttgatggatctgatgagaaatcagcatgtgtagcaatttgt
gatagatttggattgaaggggtatcagataggaaaaagcaaggtttttcttagggctgga
cagatggcagaattagatgcaaggagagctgaagttctagcaacagcagcaagaagaatc
cagagacaaatcagaacatatctcacacgtaaagaattcattgtccttaaaaaagccaca
atcaatacacaaaagaactggagagcaagacttgcgcgtatgttgtatgagtatttaagg
aaagaagctgcatctatacgtatacagaagcatatacgtggaggtatagcaagagcatca
tacaagcatttacaaggagcgtctgtatctattcagactgggcttagagcaatggctgca
agagatgagttcagaagaagaagaagaaacaaggctgcaactatagttcagactgaatgg
aggagattccatgcatgttctgaatataagaagaagcagaaagcaactcttacacttcaa
tgtctatggagatcaaaggtagcaaggaaagaactaagaatgttgaagctggctgcaaga
gatgctggagcccttagagaagctaaggacaaactggagaagcgagttgaagagctgaca
tggagattagactttgaaaagcatttgagggttgatcttgaagaagcaaagggagtagaa
atcacaaagttgcagaatgctttgcaagaaatgcaagggaaactagaagaagcacataac
caaattgttcatgagaaagaagcagcaaaaatagctattgaacaagcccctccagtcatt
aaagaagtacccgttgtagacaatactaaattggaggaattaactgatcaaaatcataaa
ctggaggatgaaattctagagtttaagaagagagttgaggaatttgagaagaaattcaat
gaagttgacaatgagagcaaaaatagacttaaagagttggaggaatcacaagcaaaaatc
tcaggtcttcaggagaccattgaaaggttagatgcaaacttatccaacctcgaatcagaa
aatcaagttttgagacaagaagcattggttgcttcaactaatgaagacctcacagaagaa
actgaaaacctcaaaagcaagatcaaagaattagagtcagaaaatgaattccttcgcaac
caaaaggtggtggtggtggagcagataaccacccctgaaaaggtctcaccacaactacag
agtttgaataatggacatgaaaagaatgatgattttgaaacaccacatgtagagcaagaa
aagacaaaggagttagaaaacaccccatattcatccctaacaaaacaaaaatcacttaca
gacagacagcaggagaaccatgatgttttaatcaagtgtcttttggaagataagagattt
gacaaaacaagaccagttgcagcatgtattgtgtataaaacattggttcaatggaggtca
tttgaggcagaaaagacacatatttttgatagaattattcacacaattcgatcttctata
gagactcaggataacatcaaagatttagcatactggctatcaacaacttcaactcttttg
ttcctactgcaaagtacaatcaaagcaagtggttcaccttataagtctccacatcgtaat
cgcgcctcacctaccacattgtttggtagaatgacacaaggttttcgtacatctcctatg
ggtatgggtatctctagtggatatagtggaatggaagggaagccaagtgcacaatcaaaa
atagaagccaaatatcctgcacttttgttcaagcaacatctaacagcttgtgtagaaaaa
ttgtatggaatgattcgtgacagcttaaagaaagagataagcccgtttttgaattcatgc
attcaggcaccaagatctactagggtgagaccaacaagaggggcatcaagaaatattctt
tcaaatattgtggcaaaacaacaggcatcaattatacactggcaaagcatcgttaatagt
ttggacaacaccttgggcatactgtctgaaaactatgttccttcaataatcacaaggaaa
attttcagtcaagtattctcattcatagatgtccagttcttcaatagcttattgcttcgt
cgtgaatgctgttcatttagtaatggagaatatgttaaatcgggtttgcatgaacttgaa
caatggtgtaagaaagcaacggatcagtttgctggatcttcatgggatgagttaaggcac
ataaggcaggcagttgggttattggtatcacaccaaaagactcaaaagtccatggaggag
atcacaaatgaactttgctcggtgttgagtgttccacaaatataccgtattggaactatg
ttctgggatgacaaatatggaactcaaggattatctcaggaggtaattggcaagatgaga
tcactaatggcagaagattcagttagcatgcccaacaattctttcttgcttgatgtggat
tcaagcataccgttttctttggaagaaatatcccaatctttccttgatattgatttatct
gaaatcgatccaccacccctccttcgtcaaagatcagattttcatttcctgttgcagcaa
atagaatga
DBGET
integrated database retrieval system
