Lactuca sativa (garden lettuce): 111890606
Help
Entry
111890606 CDS
T05352
Name
(RefSeq) adoMet-dependent rRNA methyltransferase spb1
KO
K14857
AdoMet-dependent rRNA methyltransferase SPB1 [EC:2.1.1.-]
Organism
lsv
Lactuca sativa (garden lettuce)
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lsv03009
]
111890606
Ribosome biogenesis [BR:
lsv03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
111890606
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spb1_C
FtsJ
DUF3381
Motif
Other DBs
NCBI-GeneID:
111890606
NCBI-ProteinID:
XP_052627608
LinkDB
All DBs
Position
5:complement(268513605..268518220)
Genome browser
AA seq
838 aa
AA seq
DB search
MGGKAKGKHRLDKFYHLAKEHGYRSRAVWKLIQLDSKYTFLRSSHAVLDLCAAPGGWMQA
AVERVPVGSLVIGVDLDPIRPIRGAIAVQEDITTPKCRATVKRLMSDNGVRAFDLVLHDG
SPNVGGAWAQEATSQNSLVIDSIKLASELLAPKGAFITKVFRSRDYNAVLYCLRQLFEKV
EVDKPAASRSTSAEIYIVCLKYKAPAKIDPRLFDVRHLFQSGKETPKVLDVLRGTKQKRH
RDGYEDGDTTLRKTSSVTEFIWSDAPLDILGSVTSIKFKDDTCQAIKDHALTTEEVKALC
DDLRVLGKQDFKHLLKWRIHIRKAFSPEKETPKPADVEPEKKDDDDDDDEALNEMEALTN
AMLRKKKQAKKIIAKRRAKDKARKATGMQSDVMEDGYTDIELFSLSSIKGKKDLVAVDNP
EDDGPNNEAADSDDERAQADSQDESLSDIDSEEERRRYDDQMEQLLEDAYEKYIEKKEGS
TKQRKRLKQKHSEDGQLLEGEEEEEEDVHPDEDSDNDQQIQETNPLMIPFDDTEPTEEEI
AAKWFSQDVFDDENEQETTKMDVSDDDEEDEMQIDNKKKPDNTQIMVPNKPKSKISKKNI
TAPKSQPTEDLEVVAGPDTDSSDDSSSDSSDDDVETKAEILACAKKMLRKKQREQMLDDA
YNKYMFHDDEGLPKWFIDEERKHMVPMKPITKEEVNAMKAQFKEINARPAKKVAQAKARK
KRVAMRKMEKVRKKANSISDQADISEKSKMKMIDTLYKKAVPQRPKKELVVAKKGVQVRA
GKGKMLVDRRMKSDARKQGMTKDKGKGKGKGKGKVSSKGGKGQKGKPAGPAKGKTGRK
NT seq
2517 nt
NT seq
+upstream
nt +downstream
nt
atgggtggaaaggccaagggaaagcatcgtttggataagttttaccacttggccaaagaa
catggctaccgttctcgtgctgtttggaaacttattcagctcgattccaagtacactttc
ctccgttcttctcacgccgttctcgatctctgcgccgcacccggtggttggatgcaagcc
gccgtcgaacgtgttcctgttggaagtcttgtgattggtgtcgatcttgaccctatacgc
cccattcgtggcgccattgcggtgcaagaagatattaccacgcctaagtgtagggctact
gttaagagattgatgtctgataatggtgttagggcctttgatttggtgttgcacgatgga
tctcctaatgtcggtggtgcttgggcgcaggaggctacgagtcagaattctctggttatt
gattcgattaagcttgcttcggagttgttggcccctaaaggagcatttattaccaaggtt
tttagatcccgggactacaatgctgtcctttactgtcttagacagttatttgaaaaggtt
gaagtggataaaccagctgccagtcgttccacatctgcagaaatttatattgtatgtctg
aaatataaggcacctgctaagatagatcctcgtctttttgatgttaggcatcttttccaa
agtggaaaagaaaccccaaaggtacttgatgtacttagaggaacaaagcagaagagacat
cgtgatgggtatgaagatggtgacacaacattgaggaaaaccagctcagttacagagttt
atttggtcagatgctcctctagatattcttggttctgttacatctataaaattcaaagat
gacacctgtcaagctatcaaggatcatgcattgactacagaggaggttaaagcactatgt
gatgacttgcgtgttttagggaagcaagactttaagcatttattgaagtggcgtattcat
atcagaaaggccttctctcctgaaaaggaaacccctaaacctgcagatgttgaacctgaa
aagaaggatgatgatgatgatgatgatgaagcactgaatgaaatggaggcattgacaaat
gctatgttgcgtaagaaaaaacaggcaaaaaagattattgcaaaacgtcgagctaaggat
aaagcaaggaaagcaactgggatgcagagtgatgtaatggaggatggatatactgatatc
gagttattttctctgtcatctatcaagggaaagaaggatctggtggctgttgataaccct
gaagatgatggtccaaataatgaagcagcagatagtgatgatgagagagcacaagcagac
tcccaagatgagtcactcagtgacattgactctgaagaagagcgtcgaagatatgatgat
caaatggaacaattactcgaagatgcctacgagaaatacatagaaaagaaagaagggagc
acaaagcagagaaaacggttgaagcaaaaacactctgaagatggacaacttctcgagggc
gaagaagaagaagaagaagatgttcatccagatgaagactctgacaacgatcaacaaatt
caagaaacaaatccattgatgataccatttgatgacaccgagcctaccgaagaagaaatc
gcagcaaaatggtttagtcaggatgtgtttgatgatgaaaacgaacaagaaactacaaaa
atggacgtaagtgatgacgatgaagaagacgaaatgcaaatcgataacaagaagaaaccc
gataacacccaaatcatggtcccaaacaaaccaaaatcaaaaatctcaaagaaaaacata
acagccccaaaatcccaacctactgaagatcttgaggtagtcgcgggcccggacacagat
tcgagcgatgactcatcatcggactcgtccgatgatgacgtggaaacaaaagccgaaatc
ttagcatgcgcgaagaaaatgttgcgaaagaaacaaagagaacaaatgctggatgacgcg
tacaacaaatacatgtttcacgatgatgaagggctaccgaaatggttcatagatgaagag
aggaagcacatggttccaatgaagccgataacgaaagaggaggtgaacgcaatgaaggcc
cagtttaaggaaataaatgctcggcccgctaagaaggtggcccaagcgaaggcccgaaag
aagcgcgttgcgatgaggaaaatggagaaggttagaaagaaggcgaatagtatttcggat
caagcggatatttcggagaaatcgaagatgaagatgattgatactttgtataagaaagcg
gtcccacagaggccgaagaaggaactggtggtggctaagaaaggggtgcaagtgagggct
ggaaaagggaagatgcttgtggataggaggatgaagagtgatgctaggaaacaagggatg
actaaggataaggggaaagggaaagggaaagggaaagggaaagtgagtagcaaaggtggg
aaagggcagaaagggaaaccggctggcccggccaagggtaaaacgggaagaaagtga
DBGET
integrated database retrieval system
