Lactuca sativa (garden lettuce): 111890640
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Entry
111890640 CDS
T05352
Name
(RefSeq) E3 ubiquitin-protein ligase HAKAI homolog
KO
K15685
E3 ubiquitin-protein ligase Hakai [EC:
2.3.2.27
]
Organism
lsv
Lactuca sativa (garden lettuce)
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lsv03019
]
111890640
04131 Membrane trafficking [BR:
lsv04131
]
111890640
04121 Ubiquitin system [BR:
lsv04121
]
111890640
Enzymes [BR:
lsv01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
111890640
Messenger RNA biogenesis [BR:
lsv03019
]
Eukaryotic type
mRNA processing factors
3' end processing
N6-methyltransferase complex
111890640
Membrane trafficking [BR:
lsv04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
111890640
Ubiquitin system [BR:
lsv04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
111890640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_3
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
111890640
NCBI-ProteinID:
XP_023742512
LinkDB
All DBs
Position
5:319237717..319240201
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AA seq
364 aa
AA seq
DB search
MLQIRLSNKAATSESGGGAKLPSGETVTVACPDHLVLAELPVAKSLGSASGVTLVKTVGR
RSRRHLGERVHFCVQCDFPIAIYGRLIPCEHAFCLDCARSDSICYLCDERIQKIQTIKMM
EGILICAAPHCLKSFLKKTDFEAHVYAIHSDLINSNTQKEVNNESEPLRKPTTSDSTVQA
PTPRPVQDGLQPPPMVPVRPLMNPKPNPQPPMDNRPHGFDGPSYEYPMNMNMSMGMSMSM
PPNFVVPVNVMGGGPASFGQPMYVGPPETGPWNGAPFDPSMMMNQGGGGGGVGFFQGGLL
QGGNGVGVGNDLRDGRGILPPPPPPFVGGGYFGGGGGDMGQQHGQGQGYGWQQEKRDAFN
GGQD
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atgcttcaaatcagactaagcaacaaagctgcaacttcagaaagtggtggaggagcaaag
cttccatcaggggagacagtgacagttgcatgccctgaccaccttgttcttgctgagctt
ccggtggccaagagcctcggttctgctagcggtgttactcttgtgaagacggttgggcgt
aggtcccgccgccacctcggtgaacgtgtccatttttgtgttcaatgcgacttccccatt
gccatttatggacgcttgattccttgtgagcatgcattctgtctggattgtgctaggagt
gactctatatgttatctgtgtgatgaacgtatacagaagatccaaacaattaaaatgatg
gaaggaatcttgatatgtgcagctccacattgtctaaaatcctttcttaaaaaaaccgat
ttcgaggctcacgtatacgcgatccattccgatctcatcaactcaaatactcaaaaagaa
gtcaacaacgagtccgaaccactccgaaaaccaaccacttccgactcaacggttcaagcc
ccgaccccaagaccggtccaagacgggctccaaccaccacccatggttccggttcgacca
ctaatgaaccctaaacccaacccacaaccaccaatggacaacagaccccacgggttcgat
ggaccatcttatgaataccctatgaatatgaatatgagtatggggatgagtatgagtatg
cctcctaattttgtggtcccggtcaatgtaatgggaggtgggcctgcttcgtttggtcaa
ccgatgtatgtgggccctccggaaacgggtccttggaatggggcaccatttgatccttct
atgatgatgaatcaaggtggtggtggtggaggagttggtttttttcagggaggtttatta
caaggggggaatggtgttggtgttggtaatgatttgagggatggaagggggatattgccg
ccaccaccgccgccgtttgtgggtggtggttactttggtggtggtggtggtgatatgggg
caacaacatggacagggtcaggggtatgggtggcaacaagagaagcgtgatgcttttaat
ggaggtcaagattag
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integrated database retrieval system
