Lactuca sativa (garden lettuce): 111890930
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Entry
111890930 CDS
T05352
Name
(RefSeq) uncharacterized protein LOC111890930
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111890930
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lsv03041
]
111890930
Spliceosome [BR:
lsv03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
111890930
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP
zf-UBP_var
Pox_G5
Motif
Other DBs
NCBI-GeneID:
111890930
NCBI-ProteinID:
XP_023742772
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Position
7:17822613..17826424
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AA seq
545 aa
AA seq
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MKTKRQDLENTTDSEEQHLKKQKLTEVSSPSPPQLGFDNALLPLATYEDEDDEDDERDDK
KVEENGHNNHEEEEEDDEEEENNNGFGIGRRNRAIEIRRDCPYLDTVNRQVLDFDFEKFC
SVSLSNLNVYACLVCGKYFQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDP
SLDDIRHVLNPRFSRDQVLQLDRNRQWSRALDGSDYLPGMVGLNNIKETDFVNVTIQSLM
RVTPLRNFFLIPENYINSRSVLVHRFGELTRKIWHARNFKGQVSPHEFLQAVMKASKKRF
RIGAQSDPVEFMSWLLNTLHTDLKSPKTKKSIIHQCFQGELEVVKEIHVKDESNNMNIVS
EKSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGESVTEVVRPRIARMKYR
VTRLPQYLILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPAVKEEESQRLRSKYD
LIANIVHDGKPGEGAYRVFVQRKSEELWYEMQDLHVAETLPQMVALSEAYMQIYEQQQLP
HQQMQ
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacgaagcgccaggatttggagaacactactgacagtgaagaacaacacttgaag
aagcagaaattaaccgaagtatcttctccatcgccacctcaacttggatttgataacgct
ctgcttccgcttgcaacatacgaagacgaggatgacgaagatgatgagcgtgatgataag
aaagttgaggaaaacggtcataataaccacgaggaagaggaggaagacgacgaggaagag
gagaataataatggatttggtatagggaggcgtaatagggcaattgaaatccgtagagac
tgtccctaccttgataccgttaatcgccaggttttggattttgactttgaaaagttctgt
tcagtgtctttatcaaatttaaatgtgtacgcatgtttggtatgtggtaaatacttccaa
ggaagagggcaaaagtcacatgcatatactcatagtcttgaagcaggtcaccatgtctac
attaatctcagaacagaaaaagtttattgtttgcctgatggttatgaaatcaatgaccct
tcacttgatgatattcgccatgtcctcaaccccaggtttagcagagatcaggttttgcaa
cttgatagaaacagacaatggtcaagggcgcttgatggatctgattatctccctggaatg
gttgggcttaataatattaaagagactgattttgtaaacgtgacaattcaatctttaatg
cgagtgacacccttaagaaacttcttcctcatccctgaaaattacatcaacagtagatct
gttcttgttcatcgttttggtgagctaacaaggaagatatggcatgcaagaaacttcaaa
ggacaggtgagtcctcatgaatttttgcaagcggttatgaaagcgagtaaaaaacgtttc
cgtataggggcacaatccgatccggttgaattcatgtcatggcttctcaatacccttcac
acagaccttaaaagtccaaaaaccaaaaaaagcattattcatcaatgttttcagggtgaa
ttagaagtcgtgaaagaaatccatgtcaaagatgaaagcaataatatgaatatcgtatcc
gagaaaagtagaatgccatttttaatgctgggtctcgatctacccccacctccacttttc
aaagacgtgatggaaaaaaacattattcctcaggttccactttttaatatactgaagaaa
ttcgatggggaatctgttacggaagttgtgcgacctcgtatagccaggatgaaatatcgt
gtgacgcgacttccacagtatcttatcctacacatgcggcgctttacaaaaaataatttc
tttgtggagaaaaacccaacacttgttaatttccctgtgaagaatttggagctgaaggat
tatatacctttacctgctgtgaaagaggaagaaagtcaaagactgcggtcaaagtatgat
ttaattgcaaacattgttcatgatgggaaaccgggtgaaggtgcttatagggtgtttgta
caacgcaagtccgaagagctatggtatgagatgcaggatcttcatgtggcggaaactctt
ccacaaatggtggctctttcggaggcttacatgcagatatacgaacagcaacagctgcca
catcagcaaatgcagtga
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