Lactuca sativa (garden lettuce): 111890964
Help
Entry
111890964 CDS
T05352
Name
(RefSeq) tryptophan synthase beta chain 1 isoform X1
KO
K01696
tryptophan synthase beta chain [EC:
4.2.1.20
]
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv00260
Glycine, serine and threonine metabolism
lsv00400
Phenylalanine, tyrosine and tryptophan biosynthesis
lsv01100
Metabolic pathways
lsv01110
Biosynthesis of secondary metabolites
lsv01230
Biosynthesis of amino acids
Module
lsv_M00023
Tryptophan biosynthesis, chorismate => tryptophan
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
111890964
00400 Phenylalanine, tyrosine and tryptophan biosynthesis
111890964
Enzymes [BR:
lsv01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.20 tryptophan synthase
111890964
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PALP
Motif
Other DBs
NCBI-GeneID:
111890964
NCBI-ProteinID:
XP_023742808
LinkDB
All DBs
Position
7:22157380..22163503
Genome browser
AA seq
452 aa
AA seq
DB search
MACNFPMVSLPCVRKVIPAGHEPLTLNTNLNFRSTSFTKKPNSHVVQEKTPTPGKFGSFG
GKFVPEILIAPLEKLEAEFNSILEDHEFKAELAAALRDYVGRETPLYHAHNLTDHYKNIN
GEGPEIYLKREDLGHGGSYKMSNVIAQALLAKRMGQKSVITATSAGNHGVAAAAVCAKYS
LDCTIFIGTRDIQRNPSSVQRMKLLGAQVKAVDGNFQAAVSESTRSWIENLETVYYIAGT
AVGPHPIPTMVREFYSVIGKETRKQAMEKWGGVPDVLLACVGTGCNALGLFHEFIGDESV
RMIGIEGGGVGSNTRDLHSASLVRGEVGVYHGAMCYLLQDGDGQIIRTESVASGLEFPGV
SPELSFLKDSGRLECYTVTDQEALDGYKRLCHLEGIIPALETSHAFAYLEKLCPTLTHGA
KVVVNCSGTGYNDVCSPQNKILSLSKNSLDAV
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atggcatgcaatttcccaatggtatctctcccttgtgtgagaaaagtgatacctgcaggc
cacgagccattgactttgaacacaaacctaaatttcagaagtacatcttttaccaagaaa
ccgaatagtcatgtggtgcaagagaaaactcccactccaggaaagttcggaagctttggt
gggaagtttgtacccgaaatcctgatcgcccctttagaaaaacttgaagctgaattcaac
tccattttggaggatcatgagtttaaggcggagctagcagctgcactaagggattacgtt
ggacgtgaaactcctttgtaccatgcccataatctcacagatcattacaagaacatcaac
ggagaagggcctgaaatatatcttaaaagagaggatctcggccatggaggatcatataag
atgagcaacgtcattgcacaagcacttttggccaaacgaatgggccaaaagagcgttata
acagctacgagtgctggcaaccatggtgttgcagcagctgctgtgtgtgctaagtactcc
ttagattgtactatattcattggaaccagagatattcagcgaaatccctcgagtgtgcaa
cgcatgaagttgcttggagctcaggttaaggctgttgatgggaattttcaggcagcagtc
tcagaatcaactaggtcatggatagaaaacctagaaactgtatattacatagcaggaaca
gcggtgggcccacaccctatccctacaatggtccgtgaattctattcggtgattggaaaa
gaaacaaggaagcaagcaatggagaaatggggtggggtgccagatgtgttgcttgcttgt
gtagggactggttgcaacgctttaggtttgtttcatgaattcataggggatgaaagtgta
cggatgattggaattgagggaggtggagtaggaagtaacaccagagatttacattctgca
agtcttgtaagaggtgaagttggtgtttatcatggggccatgtgttatttgctacaagat
ggagatggccaaatcattagaacagagtcagtggctagtggattggagtttccaggagta
agcccagaactaagttttctaaaagattctggcagacttgagtgttacacagttactgat
caagaagctcttgatggatacaaaagattatgccatcttgaagggataatacctgcatta
gagacctctcatgctttcgcctatctcgaaaaactttgtcctacactgactcatggcgcg
aaggttgtggttaattgcagcggcaccgggtacaatgacgtttgcagtcctcaaaataaa
atattgtcgttgtctaaaaattcattagacgcggtttag
DBGET
integrated database retrieval system
