Lactuca sativa (garden lettuce): 111891105
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Entry
111891105 CDS
T05352
Name
(RefSeq) calnexin homolog
KO
K08054
calnexin
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv04141
Protein processing in endoplasmic reticulum
lsv04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
111891105
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
111891105
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
lsv03110
]
111891105
04131 Membrane trafficking [BR:
lsv04131
]
111891105
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
lsv04091
]
111891105
Chaperones and folding catalysts [BR:
lsv03110
]
Other chaperones and cochaperones
Calnexin / calreticulin
111891105
Membrane trafficking [BR:
lsv04131
]
Endocytosis
Clathrin-mediated endocytosis
Others
111891105
Autophagy
ER-phagy
Other ER-phagy associated proteins
111891105
Lectins [BR:
lsv04091
]
L-type lectins
111891105
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Calreticulin
DUF4834
DUF6827
PcrB
Motif
Other DBs
NCBI-GeneID:
111891105
NCBI-ProteinID:
XP_023742958
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All DBs
Position
5:complement(21316573..21319982)
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AA seq
543 aa
AA seq
DB search
MEENRRKMSSLQLCCFLVIGCLVSTIYASSDAIFYESFDESFEGSWIVSEKEDYSGEWKH
SKSEGHDDYGLLVSEKARKYAIVKELEKPVELKDGTVVLQFEVRLQNGLECGGAYLKYLR
PQEAGWTAKGFDNESPYSIMFGPDKCGATNKVHFILKHKNPKSGEYVEHHLKFPPSVPSD
KLTHVYTAILKPDNEVRILVDGEEKKKANFLSGDDFEPALIPDKTIPDPEDKKPEDWDER
AKIPDPEATKPEDWDEDAPMDILDEEAEKPEGWLEDEPEEVDDPEAVKPEDWDDEEDGEW
EAPKIDNPKCEAAPGCGEWKRPLKRNPAYKGKWHAPLIDNPAYKGIWKPRDIPNPDYFEL
ETPNFEPIAAIGIEIWTMQDGILFDNVLIASDEKTAETIRETTWKPKFKVEEEKHKAEEQ
EAGFDGLKGIQKAVFDVLYKIADLPFLGDHKVKVLELIEKAEKQPNITIGVIVSIVVVIF
SVLLKLLFGGKKATPKVTVAEPAKKEEGESSNTGAAAAAEEEEKNDEQNEDAAAPRRRTR
RDI
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atggaggaaaacagaaggaagatgtcttctttgcagttgtgttgttttctagtgattggt
tgcttggtttcaaccatttacgcttcttccgacgctatattttacgagtcatttgatgaa
tcgtttgaggggagttggatcgtgtctgagaaggaagattattctggtgaatggaaacac
tcaaagagcgaagggcatgatgattatgggctcctggtgagtgaaaaggctagaaagtac
gcaattgttaaggaattagaaaagcctgttgaactcaaggatggaacagttgttctccag
tttgaagtccgtcttcaaaacggtctcgaatgtggtggtgcatatctaaaatatctccgc
ccacaggaagctgggtggacagccaaaggatttgacaacgagtctccttactcaatcatg
tttggccctgacaaatgtggtgcaacaaacaaagtccacttcatcttaaaacacaagaac
cctaaaagtggagaatatgttgaacatcatctcaagttcccaccttctgtcccttcggat
aaactcacccatgtgtacactgccattttgaaacctgataatgaggttagaatcttggtt
gatggggaagagaaaaagaaggccaatttcttgtctggtgatgactttgagcccgctttg
atcccggataaaaccatacccgacccggaggacaaaaagcccgaagattgggacgaacgg
gctaagattcccgacccggaagcaacaaagcctgaggactgggatgaggatgcgcctatg
gatattttagatgaggaagctgaaaaaccagaaggttggttggaagatgagcctgaggaa
gttgatgaccctgaagcagtgaaacccgaggattgggatgatgaagaagatggtgaatgg
gaggcgcccaagattgacaacccgaaatgtgaggcagcacctggttgtggtgagtggaag
aggccattgaaaaggaacccagcttacaagggtaaatggcatgctcctcttattgataac
cctgcttacaagggtatctggaagcctcgtgacattcctaaccctgattactttgaactt
gagacacccaactttgagccgattgctgctattggtattgagatctggacaatgcaagat
ggaatcttgtttgataatgttttgatagcaagtgatgaaaagaccgcagaaactatcagg
gagacgacatggaagcccaagtttaaggtggaggaagagaaacacaaagctgaagaacag
gaagctggttttgatggtctcaagggcatccagaaagcagtgtttgatgtcctttacaag
attgccgatctgcctttcttgggagaccacaaggtcaaggttttggaacttattgagaag
gctgaaaaacagccaaacattacaattggtgtcatagtttcgattgttgtggtgatcttt
agcgtcttgttgaagttgttgtttggtggaaagaaagctactccaaaggtgactgtagct
gaaccagcaaagaaggaagaaggtgaatcatcaaacacaggggcagcagcagcagctgaa
gaggaagagaagaatgatgagcaaaatgaggatgctgctgctccacgtagaaggacaaga
cgtgatatctga
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