Lactuca sativa (garden lettuce): 111891355
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Entry
111891355 CDS
T05352
Name
(RefSeq) alpha-amylase 3, chloroplastic isoform X1
KO
K01176
alpha-amylase [EC:
3.2.1.1
]
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv00500
Starch and sucrose metabolism
lsv01100
Metabolic pathways
lsv01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
111891355
Enzymes [BR:
lsv01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.1 alpha-amylase
111891355
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Gene cluster
GFIT
Motif
Pfam:
Ig_N_CWD1
Alpha-amyl_C2
Alpha-amylase
RRM_5
Motif
Other DBs
NCBI-GeneID:
111891355
NCBI-ProteinID:
XP_023743174
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Position
3:69890546..69907311
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AA seq
888 aa
AA seq
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MATVPLGTHFHHCCRLESPKIRINSRNSKRSHLYYSRKGSFMVKNGAKFHKFRPSFDCWV
LSTTVRASSNSSTSDTAVLDPPLSDDVISGETFPLQRIEKVEGKILIRLDSGKDEENWQL
TIGCNLPGKWVLHWGVNYENDIDSEWDQPPAEMIPPDSITIKDYAIETPLTKSSTVTETD
SIHEVKIDFNTKSSIAAINFVLKDAETGSWYQYRGRDFKVPLVDFSYANENAVGTKQGFA
IWPGTSGELSGVMVQSENSVSEDENRSCKLKEFCEEHSIVKETLVEHSMNVYIKKGSDAS
NNVLHMETDIPGDIIVHWGICKDESLKWEIPSEPHPDNTSVFKNKALRTQLQHGCTGVFP
LDEETSGFLFVLKLKDTNTWINNMGNDFYIRIPKESVSQNPENNNDEEAVSGAYTDEIID
EIRHLVTGISSAANRKTKSKEKQEIILQEIEKLAAEAYSIYRSSVQSLPQEIDEFEAVDV
DVEPPVKVSSATGSGFEILFQGFNWESNKSGRWYGELQEKVEELASLGFTVVWLPPPTES
ISPEGYMPRDLYNLNSRYGNVDELKALVKKFHQAGIRVLGDAVINHRCAHYQNQNGVWNI
FGGLLNWDDRAVVADDPHFQGRGNKSSGDNFHAAPNIDHSQEFVRKDLSEWLCWLRKEIG
YDGWRLDYVRGFWGGYVKEYMEASKPYFSVGEYWDSLSYTYGEMDHNQDAHRQRIVDWIN
DTNGSAGAFDVTTKGILHSAIERTEYWRLSDQNGKPPGVLGWWPSRAVTFIENHDTGSTQ
GHWRFPGGKEMQGYAYILTHPGTPSVFYDHMFSRYKSEISALISVRSRNKIQCRSTVKIV
KSERDVYAAVIDDKVAMKIGPGHYEPDGGSHNWKMAAQGNDYKVWEAS
NT seq
2667 nt
NT seq
+upstream
nt +downstream
nt
atggcgacggttcctcttgggactcatttccaccattgttgtcgcttagaaagccctaaa
atccgtataaattccagaaattctaaacgatctcatttgtattacagtaggaaagggagt
tttatggtaaaaaatggcgccaaattccacaagttcagaccttcttttgattgttgggtt
ctgtccaccaccgtccgagcttcttctaatagctccacctcggacacagctgtccttgat
ccaccgttgtccgatgacgtcatctccggagaaacttttccattgcaacgcatcgaaaag
gtggaaggaaagatactaatcagattagacagtggtaaggatgaggaaaactggcaacta
actataggatgtaatcttccagggaaatgggttcttcattggggagttaattacgaaaat
gacattgacagtgaatgggatcaacctcctgctgaaatgatacctcctgactctattacc
ataaaggactatgcaattgagacccctttgacaaaatcatcaactgtcacagaaacagat
tcaatccatgaagtgaagattgatttcaacactaaaagttcaattgcagctataaatttt
gtactaaaggatgcagaaactggatcttggtatcagtatagaggaagagattttaaggta
ccacttgtcgatttctcatatgctaatgaaaatgctgtgggaaccaaacaagggtttgcc
atttggccagggacttcaggggagttatcaggtgtaatggttcaatcagaaaactcagtt
tctgaagatgaaaatagaagttgtaagttgaaggaattctgtgaagagcattccattgta
aaagaaactttggttgaacattccatgaatgtttacataaagaaaggttcagatgcatct
aataatgtgctgcatatggagactgatattcctggtgatattattgttcattggggaatc
tgtaaagatgaaagtctgaagtgggaaattccttctgaaccacatccagataacacatca
gtatttaaaaacaaggctttacgtactcagttacagcatggatgcactggagtatttcca
ttagatgaagaaacttccggatttctttttgttttgaaacttaaggacaccaacacatgg
attaataacatggggaatgacttttacatacgtatcccaaaagaaagcgtctcccagaat
ccagaaaataacaatgatgaagaagctgtttctggtgcatatacggatgaaatcattgat
gaaattagacatctggtaactgggatatcatctgcagccaacaggaaaacaaaaagcaaa
gaaaaacaggagattattcttcaagagattgaaaagttagctgctgaagcgtatagtatt
tacagaagctctgttcaaagtttaccacaagagattgatgagtttgaagctgtggatgtg
gatgtggaaccacctgttaaagtaagttcagcaactggttcaggatttgagattctgttt
cagggatttaattgggagtctaataagtctggaagatggtatggggaactacaagagaag
gttgaagaattggcttcacttgggttcacggttgtttggttgcctccaccaactgaatcc
atctcacctgaaggctacatgccaagggatctatataacttaaactccaggtatggaaat
gtcgatgaattaaaggcccttgtcaagaaattccatcaagccggtataagagttctaggc
gacgcagtcataaatcaccgctgtgcacattatcaaaaccaaaacggcgtttggaacatt
tttggtggtctattaaattgggacgatcgtgcagttgttgctgatgatccccattttcaa
ggccggggaaacaagagtagtggagataatttccatgctgctccaaacatcgaccattca
caagagtttgtaagaaaagacctaagcgagtggttatgctggcttaggaaagagattgga
tacgatggatggaggttggattacgtgaggggattttggggtggttatgtaaaggaatac
atggaagcaagcaaaccctacttttccgtaggcgagtattgggattctttaagttacaca
tacggtgaaatggatcacaatcaagatgcccacagacagcgaattgttgactggataaat
gacactaatggatctgctggcgcctttgatgtcacaacaaaaggaattcttcattctgca
attgaaagaaccgaatactggagattaagcgatcaaaacggaaaacctccaggtgttctt
gggtggtggccctctcgtgctgtaacctttattgaaaatcacgatactggttctacacag
ggccactggagatttccaggtggaaaggaaatgcaaggatatgcttacatcttaacacac
cccggcacaccatccgttttctatgatcacatgttttcccgttacaaatccgaaatttcc
gcacttatctcagtcaggagccgtaataagatacaatgccggagtacagttaaaatcgta
aagtcagagagagatgtgtatgcagctgttattgatgataaggtggcaatgaagattgga
ccgggtcattatgaacctgatggtgggtcccataattggaagatggcggctcagggaaat
gattataaggtatgggaagcgtcataa
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