Lactuca sativa (garden lettuce): 111891629
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Entry
111891629 CDS
T05352
Name
(RefSeq) RNA polymerase II C-terminal domain phosphatase-like 2 isoform X1
KO
K18998
RNA polymerase II C-terminal domain phosphatase-like 1/2 [EC:
3.1.3.16
]
Organism
lsv
Lactuca sativa (garden lettuce)
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lsv01009
]
111891629
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lsv03021
]
111891629
Enzymes [BR:
lsv01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
111891629
Protein phosphatases and associated proteins [BR:
lsv01009
]
HAD phosphatases
Fcp/Scp phosphatases
111891629
Transcription machinery [BR:
lsv03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
111891629
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NIF
dsrm
DSRM_2
Motif
Other DBs
NCBI-GeneID:
111891629
NCBI-ProteinID:
XP_023743458
LinkDB
All DBs
Position
9:39777339..39781907
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AA seq
778 aa
AA seq
DB search
MSRLGFNKSVVYHGEACLGELDVIHTGDKNFQFPNNEIRIHHLSQVSERCPPLSVLLTIS
SFSVRCKLESSSPVRQPLLIDLHATCFYELKTAVVVIGDEEIHLVAMPSKLKKFPCFWCC
LVPAQLYNACLGMLNMRCLAIVFDLDETLIVANTMKSFEDRIEVLTGWIGQESDSIRVSG
MTSELKRFVEDRALLKQYIENNSVTDNGQTYNVKLEEVHMNAAGNERVVRPVIRLPEKNI
VLTRINPEIRDTSVLVRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPE
AHLIGPKQLLTRVVCVKSGARKSLLNVFQDRTCHPRMAMVIDDRLKVWDDKDQPRVHVVP
AFTPYYAPQAETANAVPVLCVARNVACNVRGGFFKEFDENLLRRLSDHFYEDEVLNLPPV
PDVCNYLMSEDASFVPNGNINPLMTEGINGPEVAHKLNQQDARNVATSASNVTTSASNVG
TGVELKSEKPQQSVPVTTIYGPPSFKSMIPSEKPSLLGPIQGPRPGHIPIFHGTSSSFSP
GFQVPPLVYEPKNEEVFHGYGLQKRNLPQVGLLSDTGLLQNQASYNSKKNLPDGGNSNFL
PPSLSIGVLQEIGQRCGFKVEYRSILSSSKDWQFSYEVLLTGEKVGVGMGKTRKDAQQQA
AENALRSLADKYVAYLMSQSETGNKDSDDSGMENGFLFETTDFPESDESLVKDGLPIDEV
SEMRRSSNFTGQQLQKPANSSRLTESTSKNSKEELPQNSLDSSSSRNQQQQKKWNRVV
NT seq
2337 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgtttagggtttaataaatcggtggtttaccatggggaagcttgtttgggtgaa
ttggatgtgattcataccggtgataagaatttccaattcccaaacaacgagattaggatt
catcatttgtctcaggtcagcgaacgatgtccacctctttcagttttgttaacaatctct
tcgttctcagttcgttgcaagcttgaatcatcatcccctgttcgacaacccctgctcatc
gatcttcacgctacttgcttctacgagctaaagacagctgtggtggtgattggagatgaa
gagattcatttggtggcaatgccaagcaagctaaagaaatttccttgtttctggtgttgt
ttggttccagctcaattgtataatgcttgcttagggatgttgaacatgcggtgtcttgcc
attgtgtttgatcttgacgagacacttattgttgcaaatacgatgaagtcttttgaggat
aggattgaggttttgactggttggattgggcaggagtctgattcgattcgggtttctggg
atgacatctgagcttaaaagatttgtggaagatcgagcattattgaagcaatacattgaa
aataattctgttactgataatggccagacatataatgtgaaactggaggaagttcatatg
aatgctgctggaaatgagcgtgttgttcgaccagttataagattacccgaaaagaatata
gtcttaacccggattaatccagagatacgtgacacgagtgtgcttgtgaggttaagacct
gcatgggaggatttaagaagctatttgattgcaaaagggcgcaaaagatttgaagtttat
gtatgcacaatggctgaaagagattatgcattggaaatgtggaggttgctagatccagaa
gcccacttaattggcccaaaacaactattaacccgtgttgtatgtgtcaaatcaggtgca
cgtaagtctttacttaatgtcttccaagatcgcacctgtcatccaagaatggctatggtg
atcgatgataggttgaaagtttgggatgataaagatcaacctagggttcatgtggtacct
gctttcactccttattatgctccacaggcagagacagcaaatgctgttcctgttctttgt
gttgcaagaaatgttgcatgcaatgttagaggtggtttctttaaagaatttgatgagaat
ctactaaggaggctttcagatcacttctatgaagatgaagttttaaatctgccacctgtc
ccagatgtttgtaactatctaatgtcagaggatgctagttttgtaccaaatggcaatata
aatcccctaatgacagaaggaatcaatggccctgaagttgctcataaacttaatcaacag
gatgcaagaaacgttgccacgtcagcatcaaatgttaccacgtcagcatcaaatgttggt
actggtgtggagttaaaatctgaaaagccacaacagtctgttccagttacaaccatctac
ggcccaccatctttcaaatcaatgataccttcagaaaaacctagcttactgggccccatc
caaggacctagacctggtcatattcctatctttcatggcacatcaagttccttttctcca
gggtttcaagttccaccacttgtatatgaaccaaagaatgaagaggtattccatggttat
ggattgcaaaagaggaatttgccacaagtgggtttactttcagatacaggcttactacag
aatcaagcatcctataatagcaaaaaaaatctccctgatggtggaaattcaaacttttta
ccaccttctttatccattggagtgctgcaggaaattggacagagatgtggttttaaggtt
gaatacagatccattttaagctctagcaaggattggcagttttcatatgaggtgttgttg
acaggtgagaaagtaggtgttggaatgggtaagaccagaaaagatgcacaacaacaagct
gccgaaaatgcccttcgcagtttggctgataaatatgtagcgtacctcatgtcacaatcg
gaaacaggaaacaaagattccgatgactctggaatggaaaatggattcctgtttgaaaca
acagactttccggaatcagatgaatcacttgtcaaagatggattgcctatcgatgaggtt
tctgaaatgaggcggtcctccaatttcacaggccagcaactccagaagccagccaactca
tcaaggttaacagaatccacaagtaaaaattcaaaagaagaattacctcaaaattctcta
gattcatcatcctcacgaaaccaacagcagcaaaagaaatggaatagagttgtgtga
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