Lactuca sativa (garden lettuce): 111891830
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Entry
111891830 CDS
T05352
Name
(RefSeq) DNA replication ATP-dependent helicase/nuclease JHS1
KO
K10742
DNA replication ATP-dependent helicase/nuclease Dna2 [EC:
5.6.2.3
3.1.-.-]
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
111891830
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lsv03032
]
111891830
Enzymes [BR:
lsv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
111891830
DNA replication proteins [BR:
lsv03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
111891830
Prokaryotic type
Elongation factors (archaeal)
Other elongation factors
111891830
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dna2
AAA_12
AAA_11
AAA_30
AAA_19
PDDEXK_1
UvrD-helicase
Cas_Cas4
ResIII
nSTAND3
Dna2_Rift
AAA_29
Motif
Other DBs
NCBI-GeneID:
111891830
NCBI-ProteinID:
XP_023743662
LinkDB
All DBs
Position
4:69294296..69302603
Genome browser
AA seq
1376 aa
AA seq
DB search
MPPRKKAASVTGGSKKSNQVQQQSSEKPSKFGIQHFFERHTQNSLSQNPQKQQPTVAKVA
SVDVGPDPVRLNEPVASTTTAGSSDSGINPRNDLGSGDANKEGNKNASQSTPIEELISVV
RGDASGNQLEVSPEFCKSVSRKRIKFSPGMLIDQSQDDGGDEVTWRISPVNERLHALTKN
LVDVRKVLGESSRFNIMKFKQSSDNKLSPCSAVKLERFLSSPPLKGAENSLKFIKGINLE
KRNLEQDLISYGSNEKAIDKHNVDFRSPFKTPPSCHDKNADSVDTNGESTQLGSKQHKKA
LLELLDQVEDVICVEDQVCTDTKTSLKSYQNKHKNRIHVERTTMGSTEKVKIEPSNVYFL
VFEVSEKQFVGSNGSQCSSKVLRLLNEQCGEERSVCLSDEWFYSVIAPGDTVHVIGEFND
EGKCDVNHDKGYLIVHPDILVSGTRVAGSFSCPRRTVLDERLKSNEQSAAALLGTLLHQL
FQAGLVKETPTKVFLEEYARILLQKNYESLYACGVYEGDVHKTMIEAIPKLLNWILLFRD
SQGPMNPNVDFGSSDGVKKVKITEVVDIEEMAWAPKYGLKGVIDASMRVKVTSKTNETSD
FIMPLEFKTGKATNGQAAMEHSAQVMLYTLLMSERYKKNIDHGLLYYLHTDQTQGISVKR
SDLVGLIMRRNELASDILKASMVQQLPPMLQVPNMCKSCRHLNACTVYHKANNGSVEGSG
LGDVYTSLVSHLTSAHCIFLKKWERLIDLEANELEVVKKDMWGSQSLKSQHSSTCLPSIV
LDTSDQIPLKNFTQGNRFVYRFVRHDVNDSNLSSSGNDLECSLKTGDYVILSTDPERLVV
ARGVIMDITHTNVTASFSKRLRLPGSSPSRIIHDLCQEVWRIDKDEFTASFATMRFNLIQ
MFLQDDRSSHLRSMIVDLHAPRYDGGCIFSQDPAVSYIWSEKTLNDDQRKAILKILTAKD
YTLILGMPGTGKTSTMVHAVKALLMRGATILLTSYTNSAVDNLLIKLKSQGIDFIRIGRE
EAVHEEIRGHCINAADMQSTKDIKVRLDEAKVVAVTCLGITSPLLCDKKFDVCIMDEAGQ
ITLPVSLGPLMFASMFVLVGDHYQLPPLVQSTEARENGMGVSLFCRLSEAHPQAISALQS
QYRMCAPIMELSNALIYGDRLRCGSPDVANAKLEYTTSTSSSSSWLKKVLDPDRQVVFIN
TDLLPALEVKEFKTVNNPLEAYIITEITVNLTCQGIKGEDIGVITPYNSQANLIKQYLPK
SVEIHTIDKYQGRDKDCILVSFVRSSNNPKNCKSSLLGDWHRINVALTRAKKKLIMVGSY
RTLSYVPILKLLMEKVEESSSSSSSCSMLNVNKMDIDININNQKGESQLKRCSQLR
NT seq
4131 nt
NT seq
+upstream
nt +downstream
nt
atgccgccgaggaagaaagccgcctccgtcaccggagggtcgaagaaatcaaatcaagtt
caacaacaatcctccgaaaaaccctccaaatttggcatccaacatttcttcgaacgccac
actcaaaactctctatctcaaaacccacaaaaacagcaacccaccgtcgcaaaagtagca
tcagttgatgtcgggccggatccagtaagactaaacgaaccggttgccagtactactact
gctggtagttccgattccgggataaaccctagaaatgatttgggttcgggggatgccaat
aaagaaggtaacaaaaatgcttctcaaagtacacctattgaggagcttatatcggttgtt
aggggtgatgctagtggaaatcagttggaggtttcacccgagttctgcaaatctgtttct
cgcaaacgaataaagttttcccctgggatgttgatagaccaaagccaggatgatggaggt
gatgaggtcacatggaggatttcaccagtaaatgagcgacttcatgcattaacaaagaat
ttagtggatgtgcgaaaagtattaggagaatcttcaaggttcaacatcatgaaattcaaa
caaagttctgataacaagttatctccttgttcagcagtcaagctagaaaggtttctttct
tctcctcctttgaaaggggctgaaaattcattgaagttcataaaagggataaatttggaa
aaacgtaaccttgagcaagatttgatttcatatggtagtaatgagaaagcaattgataag
cataatgtggactttaggagtccttttaagactccaccatcatgccacgataagaatgct
gatagtgttgatactaatggagaatcaactcagttgggttcaaagcaacacaaaaaggca
ttgctagaacttctagatcaagtagaagatgtaatatgtgttgaagatcaagtatgtaca
gacaccaaaacttcattaaaatcatatcaaaataaacacaagaatcgaatacatgtggaa
agaacaacaatgggttcaacagaaaaggtcaagatagagccttctaatgtctattttctt
gtctttgaggtatcagagaaacagtttgttggatcaaatggctcccagtgctcttcaaag
gttttaaggctactgaatgagcaatgtggagaagaacggtctgtttgtttgtcagatgag
tggttttatagtgtgatagcacctggtgacactgtacatgttattggtgaattcaatgat
gagggaaaatgtgatgtgaatcatgacaaaggttatttaattgttcaccctgatatattg
gtgtctggaactcgggtagctggtagtttcagctgtccacgtcgcactgttcttgatgaa
agattaaagagcaatgaacagtcagctgcagcactacttgggaccttacttcatcaacta
tttcaggctggacttgttaaagaaactccaaccaaagtgttccttgaggagtatgcaaga
atcttgcttcagaagaattacgagagtttgtatgcttgtggagtatatgaaggtgatgtt
cacaagaccatgattgaggcaatcccaaagctattaaattggatcttactctttcgcgat
tcacagggccctatgaatcctaatgttgattttggctctagtgatggagttaagaaggtg
aaaataactgaggttgttgatattgaggaaatggcatgggctccaaaatacgggttgaaa
ggagtcatagatgcatctatgcgtgtaaaagttacttcaaaaactaatgaaaccagtgat
ttcatcatgcctctagaattcaaaactggaaaagcaacaaatggacaggcagccatggaa
catagtgctcaagtcatgttgtacactctcctcatgtctgaaaggtacaaaaagaatata
gatcatggtctactatactatctccacacagatcaaacacagggaatttcggttaaaaga
tccgacttagtggggctaattatgaggcgtaatgaacttgcaagtgatattttgaaagca
tcaatggtgcaacagcttccaccaatgttgcaggtcccaaacatgtgcaaaagttgcaga
caccttaacgcttgtacagtctaccataaggcaaataatggaagtgttgagggaagtgga
ttgggtgatgtttacacttcacttgtgagccatttgacatctgctcattgtatctttctt
aagaaatgggaaaggttgattgatttagaagcaaatgaactggaggttgtgaagaaagat
atgtggggctcacaaagtttgaaaagtcaacattcaagtacatgtctaccctccattgtt
cttgacacttcagatcaaattccactgaaaaacttcactcaaggaaaccgatttgtttat
cgctttgtacgccatgatgtgaatgattcaaatctttcatcttcagggaatgatttggaa
tgctctcttaaaactggggactatgtgatcttgagcactgatcctgaacgtcttgtggtt
gcaagaggtgtcataatggacatcactcacaccaatgtcactgcatctttctcaaagcgc
ttaaggcttccagggagtagtccttctagaatcatccatgatctttgtcaagaggtttgg
cggattgataaagatgaatttacagcatcatttgcaacaatgaggttcaacctcattcaa
atgtttctacaagatgataggagctcacaccttcgaagcatgattgtggatcttcatgct
cctcgatatgatggtggttgtatattcagtcaagatcctgctgtatcatacatttggtca
gagaagactttgaatgatgatcaacgcaaagcaatactaaagatacttactgctaaggat
tatacacttatcctaggaatgccaggcacagggaagacttccaccatggttcatgctgtg
aaggcattgttgatgagaggtgccacaattttgctcacttcttacacaaactcagctgtt
gataatttacttatcaaattaaaatctcagggcattgattttatacgtattggtagagaa
gaagctgtgcatgaggaaatccgtggccattgcattaatgctgctgatatgcaaagcacc
aaagatattaaggtgagattagatgaagccaaagtggttgcagttacatgcttagggatt
actagccctttgctttgtgacaagaagtttgatgtatgcattatggatgaagctggacag
atcacacttcctgtttcattgggtcctttgatgtttgcatcaatgtttgtactagtggga
gatcattatcaattgcccccacttgttcagagtaccgaagctagggaaaatggaatgggt
gttagtctcttttgcagactttcagaagcacatccccaagccatttcagctttgcaaagc
cagtatcgtatgtgtgcacccattatggagctatccaatgctttgatatatggtgatagg
ttacgttgtggttctcctgatgtagcaaatgcaaaacttgagtatacaacttctacatct
tcttcttcttcatggcttaagaaggttttggatccagacagacaagtagtattcattaat
acagatcttttgcctgctttagaggttaaagaattcaagacagtaaataatccacttgaa
gcatacataatcacagagataactgtgaatttgacttgtcaaggcatcaagggggaagat
attggtgttataactccttacaactctcaggccaacctcataaaacagtatcttccaaaa
tcagtggagatacataccattgacaaataccagggaagggataaagattgcatattggtg
tcatttgtaaggtcaagcaataatccaaagaattgcaaatcttcactacttggggattgg
cacaggatcaatgtggcccttacacgtgccaagaaaaagctgattatggttgggtcatat
agaacactgtcgtatgttccaatactgaaacttttaatggagaaagtagaagaatcttct
tcctcttcctcttcttgttccatgttgaatgtaaataaaatggacattgatataaatatt
aacaaccaaaaaggagagtcacagctcaagaggtgctcccagttaaggtga
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