Lactuca sativa (garden lettuce): 111891989
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Entry
111891989 CDS
T05352
Name
(RefSeq) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv00040
Pentose and glucuronate interconversions
lsv01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
111891989
Enzymes [BR:
lsv01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
111891989
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
111891989
NCBI-ProteinID:
XP_023743838
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Position
3:complement(174981208..174982807)
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AA seq
399 aa
AA seq
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MKVVKFNLLLFVAFVSWIFVMAAESTHSNPITKGNRRGLRKKHNGPCEAHNSIDKCWRCD
PNWAHNREKLADCVQGFGHNATGGKGGEVYVVNDSSDTDLVNPKVGTLRHAVLQPQPLWI
IFRSTMTIRLCQELIFSSNKTIDGRGSHVHIAGGAGFMLQFVKNIIIFDIHMYDITPGEG
GIIRSNSTHFGRRGASDGDAITIFGSSDIWVDHCSFAGTFDGLIDVVARSTDITISNCHF
VRHDKALLFGASDTNPDENMRVTIAFNHFGKGLTQRLPAVRWGFVQVVNNDYTHWKSYAI
GGAKGATIISQGNRYVAEDGAAKEVTYRKKAPKSEWEKWTWRSEGDLMVNGAFFVNSGNP
NWAAQYKGYPLMKPEPAERVPELTKFAGAAIGCKVGLPC
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtggttaaatttaatttgcttttgttcgtagcttttgtttcttggatatttgtc
atggcggctgaatcgacacattcaaatccgattacgaagggcaataggcgagggctgagg
aagaaacacaatgggccatgcgaggctcataactctattgacaagtgttggcgatgtgat
cccaattgggcacataaccgggaaaagctcgccgactgtgttcaagggttcggtcataac
gccaccggcggaaaaggtggcgaagtttacgtagtcaatgactcatcggacaccgacttg
gttaaccctaaggtaggcactctccgtcatgccgtcctccagcctcaaccactctggata
atcttcaggagcaccatgaccatcaggctttgccaagagctcattttctccagcaacaag
accatcgacggccgtggttctcacgtccacatcgccggaggtgccgggttcatgttacaa
ttcgtgaaaaacatcatcattttcgacatccatatgtatgatattacaccaggtgaaggt
ggtatcatcagatcaaactctactcattttggacgtagaggagcaagcgacggcgacgcc
attaccatatttggatcttccgacatatgggtcgatcattgctccttcgccggaacattc
gatggtcttattgacgtggttgctcgttccaccgatatcaccatctcaaattgtcatttt
gtgagacacgataaggctttgctatttggtgcaagcgatactaacccagatgagaatatg
agagtgacaatcgctttcaaccacttcggaaaaggacttacacagagattaccggcggtg
aggtggggatttgttcaggtcgtcaacaacgactacacacattggaagagctacgcgatc
ggaggtgcaaaaggggcgacgataatcagccagggcaaccggtatgtggcggaagacggt
gcagctaaggaggtgacgtacagaaagaaagctccgaagtcagaatgggaaaagtggaca
tggagatcggagggggatctgatggttaatggagcattcttcgtgaattcaggaaaccct
aattgggctgctcaatacaagggatacccgttaatgaaaccggagccggctgagagagtc
cccgaactcactaaatttgcaggtgctgccattggatgcaaagtaggattaccatgctaa
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