Entry |
|
Name |
(RefSeq) BRCT domain-containing protein At4g02110
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KO |
K10728 | topoisomerase (DNA) II binding protein 1 |
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Organism |
lsv Lactuca sativa (garden lettuce)
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Pathway |
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Brite |
KEGG Orthology (KO) [BR:lsv00001]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
111892018
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:lsv03032]
111892018
03400 DNA repair and recombination proteins [BR:lsv03400]
111892018
DNA replication proteins [BR:lsv03032]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
111892018
DNA repair and recombination proteins [BR:lsv03400]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
111892018
|
SSDB |
|
Motif |
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Other DBs |
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LinkDB |
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Position |
8:333266993..333272188
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AA seq |
1142 aa
MENHQNSPFDRPSQVFRGIRFVLLGFDPINKAQVSRRLVNGGGIDAGVYGPNCTHVIVNK
LVYDDPLCVAARRDGKILVSGLWADHSFDVGVPVDPTSVMYRPVRDLNGIPGGKSLVICL
TGYQREDREDIMTMVDLMGAQFSKPLIANKVTHLICYKFEGEKYLLAKKMKRIKLINHRW
LEDCLKAWEIVSEADYTRSGYELEMEAEAKDSEDEAEGVVTGLTEVKKESPYHSMMLKQD
ASTSLQNTSASKGFENANDNVSVTMKTTSDQFLNPNKNVVGLTCEPSNLFKGTTSSSAFK
KSPSNESRNVMSSIYSRKVPMGTTPPTTDTSDMNSAKRLEKINLSDAFNMSSPFVEKEEQ
NESSFGKRKMEISSGSSKLQKTSHNEDTLNKESLHMESVFQEKEKNPSTEMSNHVPLGTG
IPYVSEKKVLSSKGKSVTCDEISTPPVQDKGFDEELKEASVASMFGSRDIDMLIQSEFEI
PEAQKPEHVMQSLEKSSPSAATCDIEKSSTPNLEINEQSAGSGSKSVKRKSIAKKFSAPK
QNLGKKKTVDQKGSIYLQNIEPQNDRVDVQGVGDDKNQSNEKVEDASEIEKEKMDDETES
PEDKEEHGPHTADVVMEENEHGDDVNQSNEKVEVASEAGNSVSVNVDKSKALREKKLPST
KKSKKKPAVSVKDASDKKEAEIREEGTPTPLRASKRSKRNVNDLQTAEEGVCKNDDNSTE
HLYSPSEKEKEDKVQGETENVKNNKATKSKTKKDIGLSNSVKQGTETKTVNKKGRPSSRS
CDFEAQKENIQIPVENKNKQKQALKSEKITPKSTKVNSEEPKWFILSGHKLQRREFQQMI
RPLKGKICRVSHQWSYQATHFIVPDPIRRTEKFFAAAASGSWILKTDYLSASNEAGRFLT
EEPYEWHKNGLSEDGQINLEAPRKWRLLKEKTGHGAFYGMRIVIYGECIAPTLDTLKRAV
KAGDGTIVATSPPYTRFLDTGIDYAIVSPGMPHVDIWVQEFIKHEIPCVSADYLVEYVCK
PGYPLESHVQYDTNVWAERSFNNLKNRCLTIEEEEEESMGPTTPESSDVACEVCGSRDRG
EEMLMCGNESGSIGCGVGMHIDCCDPPFEDVPEEDWFCPNCSNPKITVTNNSKKSTSKRK
AK |
NT seq |
3429 nt +upstreamnt +downstreamnt
atggaaaaccatcaaaattcgccgtttgaccgtccatctcaagtcttccgtggcattcgc
tttgttcttcttggtttcgatcctatcaacaaagctcaggtttcacggaggcttgttaat
ggcggaggcattgatgctggtgtatatggtcccaattgcactcatgttattgtcaataag
cttgtctatgatgatcccttatgtgttgctgccagaagagatgggaagatattagtctct
ggcctatgggctgatcatagctttgacgttggagtacctgtggatccaacctcggtaatg
tacagaccagtgagagatttgaacgggattccaggtggaaagtcactagttatatgttta
acagggtatcaacgtgaagatcgcgaggacattatgaccatggttgatttgatgggtgcg
cagttttcaaaaccactgatagcaaacaaggttactcatcttatatgctacaaatttgaa
ggggagaagtatctgcttgcaaagaaaatgaagaggataaagcttatcaaccatcgatgg
ttagaagactgtttaaaggcatgggagattgtctcagaagcagattatactagaagtggt
tatgagctggagatggaggctgaagccaaagattctgaagatgaagcagaaggggttgtt
actggacttactgaagtgaagaaggaaagtccatatcattcgatgatgttaaagcaggat
gcttcaacaagtctacaaaatactagtgcttctaaagggtttgaaaatgcaaatgacaat
gtgtcagtgactatgaagaccacatctgatcaatttcttaatcccaacaaaaatgttgtt
ggtcttacctgtgagccatccaatctatttaaaggaactacaagttcttcagcattcaag
aaatctccttcaaacgaatcaagaaacgtcatgtcttcaatttactctaggaaagtgcca
atgggaaccacacctccaacaacagacacaagtgatatgaacagtgctaaaagactggag
aagattaatctgagtgatgccttcaacatgtcttcaccttttgtagaaaaagaggagcaa
aatgaatcatcttttggtaagaggaagatggagatttcttctggtagttctaaactacaa
aaaacgagtcacaacgaagacacattgaataaagagagtctccatatggaaagtgtattt
caagaaaaggaaaagaatccctctactgaaatgagcaaccatgtaccactgggaactggc
atcccttatgtaagtgaaaagaaggtgttaagttctaagggtaaaagtgtaacatgtgat
gaaatttctaccccacctgtacaagacaaaggctttgatgaagaattgaaggaagccagt
gtagcatcaatgtttggtagcagagatattgatatgttaatacaatctgaatttgaaata
cctgaagctcagaagccagaacatgtgatgcaaagtcttgagaaatcatctccttctgca
gcaacttgtgatattgagaaatcaagtactccaaacttggagattaatgaacagagcgct
ggatcaggctcaaaatctgtgaaaaggaagtcaattgccaagaaattttctgcccctaaa
cagaatctaggtaaaaagaagactgtggatcaaaaaggttctatttatctacaaaacatt
gagccacagaatgatagagttgatgttcagggagtaggtgatgacaagaatcaaagtaat
gaaaaagttgaagacgcttcagagatagagaaggagaagatggatgatgaaactgagtct
ccagaggataaagaggagcatgggccacatactgctgatgtagtgatggaagaaaatgaa
catggtgatgatgtgaatcaaagtaatgaaaaagttgaagtcgcttcagaggctgggaac
tcggtttctgtgaatgtggacaaatctaaagcattgagagagaaaaaacttccttcaacc
aaaaagtcaaagaaaaaaccagctgtttcagtcaaagatgcaagtgataagaaggaagct
gaaattagggaagaaggaactccaactccacttcgagcttctaagagaagcaagagaaat
gtaaatgatttgcagacagcagaagaaggtgtttgtaagaatgatgacaacagtactgaa
catctgtattcaccatctgaaaaggaaaaggaagataaggttcagggagagacagagaat
gtgaagaacaacaaggcaactaaaagcaaaactaagaaagatattggtctttctaattct
gtcaaacaaggaactgaaacaaaaactgttaacaagaagggtagaccaagttccagatcc
tgtgattttgaagcacagaaggaaaatattcaaattccagttgaaaataaaaacaaacag
aaacaggccttaaaatctgagaaaattacccctaagtctacgaaagtgaactcagaagaa
cctaagtggttcatactgagtggacataagttgcaaagacgtgagttccagcagatgatt
cggccattaaaagggaaaatatgcagagtctctcaccaatggtcttatcaagcaactcat
ttcatcgtccctgatcccatacgcagaacagagaaattctttgctgcggctgcatctgga
agttggattctcaagactgattacttatctgcaagtaacgaggcaggaagattcctaaca
gaggagccttacgaatggcacaagaacggcctaagtgaagatggtcagattaacctggaa
gctccgaggaagtggcgccttttgaaggaaaaaaccggacatggtgccttttatggaatg
cggattgtcatatacggggaatgcattgcacccactttggacactcttaaacgggcagtg
aaagctggagatgggacaatagtggcgacttccccaccatacacccgctttctagacact
ggtatcgattatgccattgtgagccctggcatgccacatgtggatatatgggttcaggag
ttcataaaacatgagataccgtgtgtctcggctgattaccttgtggaatacgtatgcaaa
ccggggtatccccttgaatcgcatgtccaatatgatacaaatgtttgggcagaaaggtca
tttaacaatctcaagaaccggtgtttgaccatcgaagaagaagaagaagagtcaatgggg
cccacaacacctgagagcagtgatgtggcgtgtgaggtatgtggatcacgtgacagaggt
gaagaaatgttgatgtgtgggaatgaaagcggttcgattggatgtggtgttgggatgcat
atcgattgttgtgatccaccgtttgaagatgttcctgaggaagattggttttgtcctaat
tgtagcaatcccaagattacagttactaataattccaaaaagtccaccagcaaaaggaaa
gccaagtaa |