KEGG   Lactuca sativa (garden lettuce): 111892018
Entry
111892018         CDS       T05352                                 
Name
(RefSeq) BRCT domain-containing protein At4g02110
  KO
K10728  topoisomerase (DNA) II binding protein 1
Organism
lsv  Lactuca sativa (garden lettuce)
Pathway
lsv03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:lsv00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    111892018
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:lsv03032]
    111892018
   03400 DNA repair and recombination proteins [BR:lsv03400]
    111892018
DNA replication proteins [BR:lsv03032]
 Eukaryotic type
  DNA Replication Initiation Factors
   Other initiation factors
    111892018
DNA repair and recombination proteins [BR:lsv03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    BRCA1-B complex
     111892018
SSDB
Motif
Pfam: BRCT PTCB-BRCT RTT107_BRCT_5 BRCT_2 PHD
Other DBs
NCBI-GeneID: 111892018
NCBI-ProteinID: XP_023743847
LinkDB
Position
8:333266993..333272188
AA seq 1142 aa
MENHQNSPFDRPSQVFRGIRFVLLGFDPINKAQVSRRLVNGGGIDAGVYGPNCTHVIVNK
LVYDDPLCVAARRDGKILVSGLWADHSFDVGVPVDPTSVMYRPVRDLNGIPGGKSLVICL
TGYQREDREDIMTMVDLMGAQFSKPLIANKVTHLICYKFEGEKYLLAKKMKRIKLINHRW
LEDCLKAWEIVSEADYTRSGYELEMEAEAKDSEDEAEGVVTGLTEVKKESPYHSMMLKQD
ASTSLQNTSASKGFENANDNVSVTMKTTSDQFLNPNKNVVGLTCEPSNLFKGTTSSSAFK
KSPSNESRNVMSSIYSRKVPMGTTPPTTDTSDMNSAKRLEKINLSDAFNMSSPFVEKEEQ
NESSFGKRKMEISSGSSKLQKTSHNEDTLNKESLHMESVFQEKEKNPSTEMSNHVPLGTG
IPYVSEKKVLSSKGKSVTCDEISTPPVQDKGFDEELKEASVASMFGSRDIDMLIQSEFEI
PEAQKPEHVMQSLEKSSPSAATCDIEKSSTPNLEINEQSAGSGSKSVKRKSIAKKFSAPK
QNLGKKKTVDQKGSIYLQNIEPQNDRVDVQGVGDDKNQSNEKVEDASEIEKEKMDDETES
PEDKEEHGPHTADVVMEENEHGDDVNQSNEKVEVASEAGNSVSVNVDKSKALREKKLPST
KKSKKKPAVSVKDASDKKEAEIREEGTPTPLRASKRSKRNVNDLQTAEEGVCKNDDNSTE
HLYSPSEKEKEDKVQGETENVKNNKATKSKTKKDIGLSNSVKQGTETKTVNKKGRPSSRS
CDFEAQKENIQIPVENKNKQKQALKSEKITPKSTKVNSEEPKWFILSGHKLQRREFQQMI
RPLKGKICRVSHQWSYQATHFIVPDPIRRTEKFFAAAASGSWILKTDYLSASNEAGRFLT
EEPYEWHKNGLSEDGQINLEAPRKWRLLKEKTGHGAFYGMRIVIYGECIAPTLDTLKRAV
KAGDGTIVATSPPYTRFLDTGIDYAIVSPGMPHVDIWVQEFIKHEIPCVSADYLVEYVCK
PGYPLESHVQYDTNVWAERSFNNLKNRCLTIEEEEEESMGPTTPESSDVACEVCGSRDRG
EEMLMCGNESGSIGCGVGMHIDCCDPPFEDVPEEDWFCPNCSNPKITVTNNSKKSTSKRK
AK
NT seq 3429 nt   +upstreamnt  +downstreamnt
atggaaaaccatcaaaattcgccgtttgaccgtccatctcaagtcttccgtggcattcgc
tttgttcttcttggtttcgatcctatcaacaaagctcaggtttcacggaggcttgttaat
ggcggaggcattgatgctggtgtatatggtcccaattgcactcatgttattgtcaataag
cttgtctatgatgatcccttatgtgttgctgccagaagagatgggaagatattagtctct
ggcctatgggctgatcatagctttgacgttggagtacctgtggatccaacctcggtaatg
tacagaccagtgagagatttgaacgggattccaggtggaaagtcactagttatatgttta
acagggtatcaacgtgaagatcgcgaggacattatgaccatggttgatttgatgggtgcg
cagttttcaaaaccactgatagcaaacaaggttactcatcttatatgctacaaatttgaa
ggggagaagtatctgcttgcaaagaaaatgaagaggataaagcttatcaaccatcgatgg
ttagaagactgtttaaaggcatgggagattgtctcagaagcagattatactagaagtggt
tatgagctggagatggaggctgaagccaaagattctgaagatgaagcagaaggggttgtt
actggacttactgaagtgaagaaggaaagtccatatcattcgatgatgttaaagcaggat
gcttcaacaagtctacaaaatactagtgcttctaaagggtttgaaaatgcaaatgacaat
gtgtcagtgactatgaagaccacatctgatcaatttcttaatcccaacaaaaatgttgtt
ggtcttacctgtgagccatccaatctatttaaaggaactacaagttcttcagcattcaag
aaatctccttcaaacgaatcaagaaacgtcatgtcttcaatttactctaggaaagtgcca
atgggaaccacacctccaacaacagacacaagtgatatgaacagtgctaaaagactggag
aagattaatctgagtgatgccttcaacatgtcttcaccttttgtagaaaaagaggagcaa
aatgaatcatcttttggtaagaggaagatggagatttcttctggtagttctaaactacaa
aaaacgagtcacaacgaagacacattgaataaagagagtctccatatggaaagtgtattt
caagaaaaggaaaagaatccctctactgaaatgagcaaccatgtaccactgggaactggc
atcccttatgtaagtgaaaagaaggtgttaagttctaagggtaaaagtgtaacatgtgat
gaaatttctaccccacctgtacaagacaaaggctttgatgaagaattgaaggaagccagt
gtagcatcaatgtttggtagcagagatattgatatgttaatacaatctgaatttgaaata
cctgaagctcagaagccagaacatgtgatgcaaagtcttgagaaatcatctccttctgca
gcaacttgtgatattgagaaatcaagtactccaaacttggagattaatgaacagagcgct
ggatcaggctcaaaatctgtgaaaaggaagtcaattgccaagaaattttctgcccctaaa
cagaatctaggtaaaaagaagactgtggatcaaaaaggttctatttatctacaaaacatt
gagccacagaatgatagagttgatgttcagggagtaggtgatgacaagaatcaaagtaat
gaaaaagttgaagacgcttcagagatagagaaggagaagatggatgatgaaactgagtct
ccagaggataaagaggagcatgggccacatactgctgatgtagtgatggaagaaaatgaa
catggtgatgatgtgaatcaaagtaatgaaaaagttgaagtcgcttcagaggctgggaac
tcggtttctgtgaatgtggacaaatctaaagcattgagagagaaaaaacttccttcaacc
aaaaagtcaaagaaaaaaccagctgtttcagtcaaagatgcaagtgataagaaggaagct
gaaattagggaagaaggaactccaactccacttcgagcttctaagagaagcaagagaaat
gtaaatgatttgcagacagcagaagaaggtgtttgtaagaatgatgacaacagtactgaa
catctgtattcaccatctgaaaaggaaaaggaagataaggttcagggagagacagagaat
gtgaagaacaacaaggcaactaaaagcaaaactaagaaagatattggtctttctaattct
gtcaaacaaggaactgaaacaaaaactgttaacaagaagggtagaccaagttccagatcc
tgtgattttgaagcacagaaggaaaatattcaaattccagttgaaaataaaaacaaacag
aaacaggccttaaaatctgagaaaattacccctaagtctacgaaagtgaactcagaagaa
cctaagtggttcatactgagtggacataagttgcaaagacgtgagttccagcagatgatt
cggccattaaaagggaaaatatgcagagtctctcaccaatggtcttatcaagcaactcat
ttcatcgtccctgatcccatacgcagaacagagaaattctttgctgcggctgcatctgga
agttggattctcaagactgattacttatctgcaagtaacgaggcaggaagattcctaaca
gaggagccttacgaatggcacaagaacggcctaagtgaagatggtcagattaacctggaa
gctccgaggaagtggcgccttttgaaggaaaaaaccggacatggtgccttttatggaatg
cggattgtcatatacggggaatgcattgcacccactttggacactcttaaacgggcagtg
aaagctggagatgggacaatagtggcgacttccccaccatacacccgctttctagacact
ggtatcgattatgccattgtgagccctggcatgccacatgtggatatatgggttcaggag
ttcataaaacatgagataccgtgtgtctcggctgattaccttgtggaatacgtatgcaaa
ccggggtatccccttgaatcgcatgtccaatatgatacaaatgtttgggcagaaaggtca
tttaacaatctcaagaaccggtgtttgaccatcgaagaagaagaagaagagtcaatgggg
cccacaacacctgagagcagtgatgtggcgtgtgaggtatgtggatcacgtgacagaggt
gaagaaatgttgatgtgtgggaatgaaagcggttcgattggatgtggtgttgggatgcat
atcgattgttgtgatccaccgtttgaagatgttcctgaggaagattggttttgtcctaat
tgtagcaatcccaagattacagttactaataattccaaaaagtccaccagcaaaaggaaa
gccaagtaa

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