Lactuca sativa (garden lettuce): 111892040
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Entry
111892040 CDS
T05352
Name
(RefSeq) ubiquitin-like modifier-activating enzyme atg7
KO
K08337
ubiquitin-like modifier-activating enzyme ATG7
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
111892040
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lsv04131
]
111892040
04121 Ubiquitin system [BR:
lsv04121
]
111892040
03029 Mitochondrial biogenesis [BR:
lsv03029
]
111892040
Membrane trafficking [BR:
lsv04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
111892040
Atg8 conjugation proteins
111892040
Ubiquitin system [BR:
lsv04121
]
Ubiquitin-activating enzymes (E1)
UBL-activating enzymes
111892040
Mitochondrial biogenesis [BR:
lsv03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
111892040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG7_N
ThiF
Shikimate_DH
2-Hacid_dh_C
rRNA_methylase
Motif
Other DBs
NCBI-GeneID:
111892040
NCBI-ProteinID:
XP_023743869
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All DBs
Position
7:complement(32864754..32868803)
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AA seq
716 aa
AA seq
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MAGTENGPILQFAPFQSSVDAGFWHELSSLKLNKLKTDESPIPITGFYTPCSNSQVSSHL
TLLTESLPTDPTDEQQAKTNHGNRNKCSVPGILYNTNTLEGYHALDKQALLKAEAKKIWD
DIRSGKAEEDSSVLSRFLLISFADLKKFNFYYWFAFPGVVLDPPATLVDLKPASKWFSPK
EAESVSASCNEWRMSSLTAGVPFFLVSISSNSQATIRPLKDFEACQHEGHKMLFGFYDPS
HLPNNPGWPLRNFLVFISAKWNLKKIQFLCYRENHGFADLGLSLVGEALIQPSQAWQDQD
HVPNAVGWELNKGKRSSRCINLSTSMDPTRMAISAADLNLKLMMWRALPSLNLTMLSTTK
CLLLGAGTLGCQVARMLMAWGVRKITLVDSGKVAMSNPLRQSLYTLEDCLNGGDFKALAA
VKSLKRIFPAVEAEGVVMAIPMPGHPVARQEEEKVVDDCKRLSDLIESHDAVFLLTDTRE
SRWLPTLLCANANKVTITGALGFDSFLVMRHGAGPLLSRNTSSKAETESVVGSSLSAGVE
EMSLGQKDSKPRLGCYFCNDVVAPVDSTANRTLDQQCTVTRPGLAPIASALAVELLVGIL
HHPHGISAKAEFGNSLDSVNSEQALGILPHQIRGALSQFSQMILVGHSSNSCTACCPIVV
SEYRKRGLEFVLEAINHPTYLEDLTGLTELMISANSFDLDWDNETDNDDDDDCVEI
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atggcgggaactgagaatgggcctattctgcaatttgcaccctttcagagttctgtggat
gccggtttttggcatgaattatcttcgttgaaactcaacaaattaaaaactgatgaatct
ccaatcccaataacgggtttttacacaccttgctccaattctcaagtatcaagccatcta
actctgcttactgaatccttgccaactgatccaactgatgaacaacaagccaaaacaaat
catgggaacagaaacaaatgctctgtgcctggcattctttacaacacaaacacattagaa
gggtatcacgctctggataaacaagctttgttaaaggctgaagcaaaaaagatttgggat
gatattcgatctggaaaagcagaggaggacagttctgtcctttcaaggttccttcttata
tcatttgcagacctcaagaaatttaacttctattactggtttgcttttcctggtgtcgtt
cttgaccctccagcaactttggttgatttgaagccagcatcaaaatggttctccccaaaa
gaggctgaatctgtgtctgcatcctgtaatgagtggcgtatgtcaagtttaacagcaggt
gttccattctttttagtctccatttcttcaaattcgcaagctactattagacctctaaag
gactttgaagcttgtcaacatgaaggccacaagatgctctttggtttctatgaccctagt
catcttccaaacaaccctggatggcctcttcgcaactttcttgtcttcatttctgcaaaa
tggaacctgaaaaagattcagtttttatgctatcgtgagaaccatgggtttgctgatttg
ggtttatcccttgttggtgaagctctgatccaaccttcacaagcatggcaagatcaagat
cacgtgcctaatgcagttggatgggaactgaataaagggaaaagatcctctagatgcatt
aacctatctacttccatggaccccactaggatggctatatcagctgcagatctgaatcta
aaactgatgatgtggcgagcactgccatctttgaacttgaccatgctgtctaccaccaag
tgccttctgttgggagccgggacccttggatgccaggtggcacgcatgcttatggcatgg
ggtgtgcgaaaaataacattggtggatagtggtaaagtggccatgtcaaatccattaaga
caatccctatacaccttggaagattgtctcaatggtggtgatttcaaagccttggcagct
gttaaaagtctgaagcgaatttttccagctgtggaagcagaaggggtagtgatggcaata
cctatgcctgggcatccagttgctagacaagaagaggaaaaagtggttgatgactgcaaa
cgtctttctgatttaatcgagtctcatgatgctgtttttttattgactgatacacgcgaa
agtagatggcttccaactcttttatgtgccaatgctaataaggttacaattacgggtgca
ttggggtttgatagtttcttggtaatgcgtcatggtgcgggcccactactcagcagaaat
acatcatcaaaagctgagactgagagtgttgttggctcttctttatctgctggtgttgaa
gaaatgtcactgggacagaaagatagcaagccgagactcggttgttacttctgtaatgac
gttgttgcccctgtggattcaacagctaaccgcactttggaccaacaatgcacggttaca
cgccctggacttgcccctatcgcatccgcccttgcggttgaacttttggttgggattttg
catcatcctcatgggatatcagcgaaagctgaatttggaaactctttggatagtgtaaat
agcgaacaagctcttgggatattaccacatcagatccgtggggccctctcgcagttttct
caaatgatacttgtgggccattcctcaaatagctgcactgcttgttgcccgattgtggtt
tcagagtataggaaaaggggactggaatttgttctagaagctattaatcatcctacttat
ttggaggatttaacgggactaacggagctcatgatatcagcaaactcttttgaccttgac
tgggataacgagactgataatgatgatgatgatgattgtgttgaaatctga
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