KEGG   Lactuca sativa (garden lettuce): 111892053
Entry
111892053         CDS       T05352                                 
Name
(RefSeq) UBP1-associated protein 2C
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
lsv  Lactuca sativa (garden lettuce)
Pathway
lsv03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:lsv00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    111892053
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lsv03019]
    111892053
   03041 Spliceosome [BR:lsv03041]
    111892053
Messenger RNA biogenesis [BR:lsv03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     111892053
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     111892053
Spliceosome [BR:lsv03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    111892053
SSDB
Motif
Pfam: RRM_1 RRM_7 AbiGi
Other DBs
NCBI-GeneID: 111892053
NCBI-ProteinID: XP_023743883
LinkDB
Position
7:complement(32859407..32862339)
AA seq 401 aa
MDLSKKRKMEENGQYTTDVTNDVATPPSFSSITLTPQDARKILESFTKEQLLDVLQTAVV
RDVTVLEAVRSVADSDPTKRKLFIRGIGWETTTDKLRSTFSDFGELEEAIVITDKNTGKS
KGYGFVTFKHIDGAVLALKTPSKKIDGRITVAQLAASKDSANVDVSTRKVYVGNVPFVIS
SERLLSHFSSYGEIEEGPLGFDKQSGKQKGFAFFVYKTEEGARNSLMDSIKNIDGHQVMC
KMATDGKKGKVGGPQGSNGRPVDSVRSMPGSMNSGYGMPGGITSYGGYSSGPPLLHQNPQ
LNSSMPSSVSSGPGYGSQGPPSYGGGGGYAGGGSHYGGDTALDHPGLNNYPSSMNRFPPS
QGGYSDGGSYGSSAYSTQPYLPPSGPRVPHGGTYQSGPPYY
NT seq 1206 nt   +upstreamnt  +downstreamnt
atggatctttcgaagaagagaaaaatggaggagaacggccaatacaccaccgatgtcaca
aatgacgtcgcgactccgccgtcattctcctctataactctcactccacaggatgcgcgc
aagatcctggaatccttcactaaggaacagctcctcgacgttttacaaaccgctgtcgta
cgtgacgttaccgttctggaggccgttcgttcagtagcggattccgatcctaccaaacgt
aaacttttcatccgcggtatcggttgggaaacaaccacggataagcttcgatcgaccttt
tcggattttggggaacttgaagaggctatcgtaataactgataaaaatactggaaaatcg
aaaggttatggatttgttacttttaaacatatagacggcgcggttttggctctgaaaaca
ccaagtaagaagatcgatggtagaattacggttgcgcagttagcggcgtctaaggattca
gctaatgttgatgtgtctacgaggaaggtgtacgttggcaatgtcccgtttgtgatatca
tcggaaagattactgagtcatttttcatcatatggggagatagaagaaggaccattaggg
ttcgataaacagtcagggaagcaaaaggggtttgctttttttgtttataaaactgaggaa
ggggcgaggaattcacttatggattcaatcaagaacattgatgggcaccaggttatgtgt
aaaatggctactgatgggaagaagggtaaagtaggtggtccacaagggtctaatgggaga
cccgttgattccgttcgatcaatgccaggttccatgaactccggctatggtatgccaggt
gggataacatcgtatggtgggtactccagtggacctccattgcttcatcaaaatccgcaa
ctgaattcttcaatgccttcgtcagtgagcagtggtccaggttatgggagtcaagggcca
ccctcatatggcggtggtggtgggtatgctggtggtggctcacattatggtggtgataca
gccctggatcatcctgggcttaacaattatccatcttctatgaacagatttcccccatct
cagggtggatacagtgatggtggaagctatggttcttcagcttactcaacacaaccttac
cttccacctagtggtccaagagtccctcatggtgggacgtaccagagtggcccaccatat
tattga

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