Lactuca sativa (garden lettuce): 111892125
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Entry
111892125 CDS
T05352
Name
(RefSeq) protein mago nashi homolog
KO
K12877
protein mago nashi
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv03013
Nucleocytoplasmic transport
lsv03015
mRNA surveillance pathway
lsv03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111892125
09122 Translation
03013 Nucleocytoplasmic transport
111892125
03015 mRNA surveillance pathway
111892125
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lsv03019
]
111892125
03041 Spliceosome [BR:
lsv03041
]
111892125
Messenger RNA biogenesis [BR:
lsv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
111892125
Spliceosome [BR:
lsv03041
]
Complex C
Other components
EJC/TREX
111892125
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mago_nashi
Motif
Other DBs
NCBI-GeneID:
111892125
NCBI-ProteinID:
XP_023743963
LinkDB
All DBs
Position
2:complement(224904157..224905716)
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AA seq
155 aa
AA seq
DB search
MAEEENGATGGGEFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEVF
LTPSVLKECRRIVSDSDIMKEDDNNWPEPDRVGRQELEIVMGNEHISFTTSKIGSLMDVQ
TSNDPEGLRIFYYLVQDLKCFVFSLISLHFKIKPI
NT seq
468 nt
NT seq
+upstream
nt +downstream
nt
atggcggaagaggagaacggagcgaccggcggcggggagttttacctgaggtactacgta
gggcacaagggaaagtttggacatgaatttttggagtttgagttccgacctgacgggaag
ctccgctacgccaacaactccaactacaagaacgacaccatgatccgcaaggaggtcttc
ctcaccccttctgttctcaaagagtgccgccgtattgtctccgattccgatattatgaag
gaggatgacaacaactggccagaaccagatcgtgtaggacgacaagagcttgagattgtg
atggggaatgaacacatctccttcactacttccaagattgggtcgctaatggatgttcag
actagtaatgatcctgaaggcctccgcatcttctattatctcgtccaggacttgaagtgt
tttgtgttctccctgatctctcttcatttcaagatcaagccgatttaa
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integrated database retrieval system