KEGG   Lactuca sativa (garden lettuce): 111892125
Entry
111892125         CDS       T05352                                 
Name
(RefSeq) protein mago nashi homolog
  KO
K12877  protein mago nashi
Organism
lsv  Lactuca sativa (garden lettuce)
Pathway
lsv03013  Nucleocytoplasmic transport
lsv03015  mRNA surveillance pathway
lsv03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:lsv00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    111892125
  09122 Translation
   03013 Nucleocytoplasmic transport
    111892125
   03015 mRNA surveillance pathway
    111892125
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lsv03019]
    111892125
   03041 Spliceosome [BR:lsv03041]
    111892125
Messenger RNA biogenesis [BR:lsv03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     111892125
Spliceosome [BR:lsv03041]
 Complex C
  Other components
   EJC/TREX
    111892125
SSDB
Motif
Pfam: Mago_nashi
Other DBs
NCBI-GeneID: 111892125
NCBI-ProteinID: XP_023743963
LinkDB
Position
2:complement(224904157..224905716)
AA seq 155 aa
MAEEENGATGGGEFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEVF
LTPSVLKECRRIVSDSDIMKEDDNNWPEPDRVGRQELEIVMGNEHISFTTSKIGSLMDVQ
TSNDPEGLRIFYYLVQDLKCFVFSLISLHFKIKPI
NT seq 468 nt   +upstreamnt  +downstreamnt
atggcggaagaggagaacggagcgaccggcggcggggagttttacctgaggtactacgta
gggcacaagggaaagtttggacatgaatttttggagtttgagttccgacctgacgggaag
ctccgctacgccaacaactccaactacaagaacgacaccatgatccgcaaggaggtcttc
ctcaccccttctgttctcaaagagtgccgccgtattgtctccgattccgatattatgaag
gaggatgacaacaactggccagaaccagatcgtgtaggacgacaagagcttgagattgtg
atggggaatgaacacatctccttcactacttccaagattgggtcgctaatggatgttcag
actagtaatgatcctgaaggcctccgcatcttctattatctcgtccaggacttgaagtgt
tttgtgttctccctgatctctcttcatttcaagatcaagccgatttaa

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