Lactuca sativa (garden lettuce): 111892129
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Entry
111892129 CDS
T05352
Name
(RefSeq) LOW QUALITY PROTEIN: cell division cycle 20.5, cofactor of APC complex
KO
K03363
cell division cycle 20, cofactor of APC complex
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
111892129
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lsv04121
]
111892129
03036 Chromosome and associated proteins [BR:
lsv03036
]
111892129
Ubiquitin system [BR:
lsv04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
APC/C
Target recognizing subunit
111892129
Chromosome and associated proteins [BR:
lsv03036
]
Eukaryotic type
Sister chromatid separation proteins
APC/C complex
111892129
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_CDC20-Fz
Beta-prop_THOC3
Beta-prop_WDR5
Beta-prop_IFT122_1st
Beta-prop_WDR3_1st
WD40
WD40_WDHD1_1st
WD40_Prp19
Beta-prop_EML_2
ANAPC4_WD40
WDR55
Beta-prop_TEP1_2nd
Beta-prop_WDR3_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_WDR36-Utp21_2nd
EIF3I
DSE1_N
Beta-prop_WDR19_1st
Beta-prop_WDR90_POC16_2nd
WD40_Gbeta
Beta-prop_RIG_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_2nd
Beta-prop_Aladin
Beta-prop_VPS8
Beta-prop_HPS5
WDR54
Beta-prop_NOL10_N
Beta-prop_WDR75_1st
NBCH_WD40
Beta-prop_WDR35_TULP_N
Beta-prop_EIPR1
Beta-prop_RIG_1st
Beta-prop_SCAP
Beta-prop_DCAF4
Beta-prop_Vps41
Motif
Other DBs
NCBI-GeneID:
111892129
NCBI-ProteinID:
XP_023743972
LinkDB
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Position
2:224683271..224685935
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AA seq
483 aa
AA seq
DB search
MSNQQDLSSYSHVLPIPNSIHHTEMMELELNSDPLRDWKLQSDWYSPTRLHNSPVEYDFP
GDRFIPNRSLMDLDQAYTLLTNRTNFSTRCNFSAEYRRIMEGNLTLDSEGRPFRMLVFRG
SPKSSXKSIRYIDEIRRSDEENFNNNTSNQQRKLPKKESRILDAPDLRDDFYMNIMDWGK
NNILAIALGRRLYLWNAANEGLHHIFKPNALNDHPSSVSWSHDGKTLAVGHSSSKIQLWD
AETCKLIRRLEGHHAMVRATSWNGHILTSGGNKAILNHDARVRNSLVSEVKAHRSRVCGL
KWSMTGNLLASGGDDNVVYIWEASRMNSARFVHRFTNHVAAVKALAWCPYNFQVLASGGG
TDDGCIKLWNTQQGTCITSVNTEAQICGLEWNRHYKEIVSGHGFSTNDDRKNTLSLWRYP
SMVKAGELSSHSSRVLQLAQNPDGLTLVSAGGDETLRFWEIFGPPPPVKGPYSVLSSKAF
PIR
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaccaacaggatctttcttcctactctcatgttcttccgatcccaaattccatc
catcatacggaaatgatggaattggaattgaattcagaccctttaagggattggaaatta
caatcggattggtactctccaactcgcctccataacagccccgtcgaatatgattttccg
ggcgatcggttcatacccaacaggagtttgatggatcttgatcaagcctacaccctgttg
accaacagaaccaatttttctaccagatgcaattttagtgcggaataccgaagaataatg
gaggggaatctgactttggatagcgaaggaagacccttcagaatgcttgttttcagagga
agcccgaaatcaagtnagaaatcaatccgatacattgatgaaatccgtcgtagtgatgaa
gaaaatttcaacaataacacctcaaaccaacaaagaaaacttcccaagaaagaatcaaga
atactggatgcaccagatctaagggatgatttctacatgaacataatggattgggggaag
aacaatattcttgcgattgcattgggtcgaagattgtacctctggaacgctgcgaatgaa
gggcttcatcatatatttaaacctaacgccttgaatgatcatccgtctagcgtttcatgg
tctcatgacggcaaaacactcgccgttggtcattcaagctccaagattcagctctgggac
gccgaaacttgcaaactcatcagaagactagagggtcaccatgcgatggtcagagcaact
tcatggaatggccacattttaacatcaggcggcaacaaagctatcttgaaccatgatgcg
agggtgagaaacagtttggtgtcagaagtgaaggcgcacaggagtcgtgtgtgtggattg
aaatggtcaatgactgggaacttactggctagtggtggtgatgataacgtggtgtacatc
tgggaagcatcacggatgaactcagcccggtttgtccaccgcttcactaaccatgtggct
gcagtcaaggctcttgcttggtgcccttataactttcaagtcttagcctccggtggtggc
acagatgatggctgcattaagttatggaacactcaacaagggacttgtatcactagtgtc
aacacagaagcacagatttgtgggctggaatggaacagacattataaggagatagtaagt
gggcatgggttcagcacaaatgatgatcgtaagaacacgctgtcactatggaggtaccct
tcaatggttaaagcaggggagttatcaagccactcatcgcgagtgttgcagctggctcag
aacccggatggactcacattggtgtcggctggaggggatgagacactgcggttttgggag
atttttgggcctcctccgccggttaaaggaccatacagtgtcttgtcgtccaaggcattt
cctataagatga
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