Lactuca sativa (garden lettuce): 111892228
Help
Entry
111892228 CDS
T05352
Name
(RefSeq) probable beta-1,4-xylosyltransferase IRX10L
KO
K20870
putative beta-1,4-xylosyltransferase IRX10 [EC:2.4.2.-]
Organism
lsv
Lactuca sativa (garden lettuce)
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
lsv01003
]
111892228
Glycosyltransferases [BR:
lsv01003
]
Polysaccharide
Structural polysaccharide
111892228
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exostosin_GT47
RXYLT1_C
Motif
Other DBs
NCBI-GeneID:
111892228
NCBI-ProteinID:
XP_023744067
LinkDB
All DBs
Position
4:145970538..145973202
Genome browser
AA seq
416 aa
AA seq
DB search
MTNRSWGFILLVLSAIVLNLDAFELRKGQKTERISGSAGDVLEDDPVGRLKVFVYELPSK
YNKKILQKDPRCLNHMFAAEIYMHRFLLSSPVRTLNPEEADWFYTPVYTTCDLTPNGLPL
PFKSPRMMRSAIQLISSNWPYWNRTEGADHFFIVPHDFGACFHYQEEKAIERGILPLLQR
ATLVQTFGQRNHVCLKEGSITVPPYAPPQKMQSHLIPPSIPRSIFVYFRGLFYDVGNDPE
GGYYARGARAAVWENFKDNPLFDISTEHPTTYYEDMQRAVFCLCPLGWAPWSPRLVEAVI
FGCIPVIIADDIVLPFADAIPWEDIGVYVDEKDVPNLDTILTSIPTEVILRKQRLLANPS
MKQAMLFPHPAQSGDAFHQILNGLARKLPHDKSVYLRKGEKVLNWTAGPLADLKPW
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgacgaatcggagttggggttttattttgctggttttgtctgctatcgtgttgaatctt
gatgcttttgagcttcgtaaaggtcaaaaaaccgagagaatttcaggtagtgcaggggac
gtattggaagatgatccagttggaaggttaaaagtgtttgtttatgagcttccaagtaaa
tacaacaagaaaatattacaaaaagaccctcgatgtctcaaccacatgtttgcagctgaa
atttacatgcacagattccttttatcaagccctgttagaaccctaaatccagaagaagcc
gattggttttacacccctgtttacaccacttgtgacctaacaccaaatggcctcccttta
cctttcaaatcacctcgtatgatgagaagtgcaattcaacttatttcctccaattggcct
tattggaatagaactgaaggagctgatcatttcttcattgtccctcatgattttggtgct
tgttttcattatcaagaagaaaaagctattgaaagagggattcttcctcttcttcaaagg
gctactttggtccaaacatttggtcaaaggaatcatgtttgtttgaaagagggttcgatt
acagttcccccttatgcccctccacaaaagatgcagtctcatttgatccctccaagtatt
ccaagatctatctttgtttactttagaggcttgttttatgatgtaggaaatgaccctgaa
ggtggttattatgcaagaggagcaagagcagcagtgtgggaaaacttcaaagacaatcca
ctttttgacatctcaacagaacatccaacaacatactatgaagacatgcaaagagctgtt
ttctgcttatgtccactcgggtgggccccatggagtccaagactagttgaagcagttata
ttcggttgcattccagtcatcatagcagatgacattgtcttaccttttgctgatgcgatt
ccatgggaagacattggtgtctatgtggatgaaaaagatgttccaaatttggacaccatt
ttgacatcaattccaacagaagtgatattgagaaaacagagattgcttgctaatccttca
atgaaacaggccatgttgtttcctcatcctgctcaatcaggtgatgcttttcatcagatc
ttgaatgggcttgcacgtaaattgcctcatgataagagtgtttatttgaggaaaggggag
aaggtgttgaattggactgcaggtcctttagctgatcttaagccttggtag
DBGET
integrated database retrieval system
