Lactuca sativa (garden lettuce): 111892306
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Entry
111892306 CDS
T05352
Name
(RefSeq) ATP-dependent Clp protease ATP-binding subunit ClpA homolog CD4A, chloroplastic
KO
K03696
ATP-dependent Clp protease ATP-binding subunit ClpC
Organism
lsv
Lactuca sativa (garden lettuce)
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
lsv03110
]
111892306
Chaperones and folding catalysts [BR:
lsv03110
]
Heat shock proteins
HSP100
111892306
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
Clp_N
AAA_lid_9
ClpB_D2-small
AAA
AAA_5
AAA_16
Sigma54_activat
AAA_22
UVR
TniB
nSTAND3
AAA_14
NACHT
AAA_18
Mg_chelatase
Zeta_toxin
AAA_25
IstB_IS21
Torsin
Motif
Other DBs
NCBI-GeneID:
111892306
NCBI-ProteinID:
XP_023744148
LinkDB
All DBs
Position
4:complement(145437945..145442502)
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AA seq
918 aa
AA seq
DB search
MSGALIHAASFLVRERVNGTTKEKRTVKMMACSYAPPMRMRTFSGLRGSNALDNIMKSPQ
DFHSKVAIATSIRKQKTSRIVPKAMFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLG
LIGEGTGIAAKVLKSLGINLKDSRMEVEKIIGRGSGFVAVEIPFTPRAKRVLELSLEEAR
NLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPTNIRTQVIRMVGESAEAVGAGVGGG
GASGSKMPTLEEYGTNLTKLAEEGKLDPVVGRQSQIERVTQILGRRTKNNPCLIGEPGVG
KTAIAEGLAQRIANGDVPETIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDD
IILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLDEYRKHIEKDPALERR
FQPVKVPEPSVEETIQILKGLRERYEIHHKLRYTDEAVVAAAELAHQYISDRFLPDKAID
LIDEAGSRVRLRHAQLPEEARELEKEVRQITKEKNEAVRGQDFEKAGELRDREMDLKTQI
SALIDKNKEMNKAESEAGEAGPTVTEADIQHIVSTWTGIPVEKVSSDESNRLLKMEDTLH
NRIIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKSLATYYFGSEE
AMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVF
NMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSNVIEKGGRRIGFDLDYDEKDSSYNR
IKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFERLKGKEIDLQVT
ERFRDRVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDLDGNVTV
LGGSGGAQPEILPEPIAL
NT seq
2757 nt
NT seq
+upstream
nt +downstream
nt
atgtctggggctttaattcacgcagcctccttccttgttcgtgaaagagtaaatggaacc
acaaaagagaaaagaacagttaaaatgatggcatgttcttacgcacctcccatgagaatg
agaaccttttcaggattaagaggatcaaatgcattagataacataatgaaatccccccaa
gatttccattcaaaggtagctatagcaacctctatacgaaaacaaaaaacctcccgaatt
gtaccaaaagccatgtttgagcgcttcacagagaaggctataaaagtaattatgcttgca
caagaggaagcacgtcgtttaggccacaattttgttgggactgagcaaatattactaggc
ctaatcggtgaaggaactggcattgcagccaaggttttgaagtcattgggaatcaatttg
aaggattcacgtatggaagttgagaaaattattggtaggggtagtggatttgttgctgtt
gagattccattcacccctcgagctaaacgtgttttggaactctcattggaggaagctcgt
aatcttggtcacaactatattggatcagagcacttgctacttggtttgctacgtgaagga
gaaggtgttgcagctcgtgttcttgagaatttaggagctgaccccactaacattcgcact
caggtgattcgaatggttggggagagtgcagaagctgtgggtgctggagttggaggtgga
ggagcttcaggaagcaagatgccaacacttgaggaatatgggacaaacttgacaaagtta
gcagaggagggtaagttggatccggttgttggaaggcaatcacagattgaaagagtgaca
cagattttagggcgtagaacaaagaataatccatgcctcattggagaacctggtgtagga
aagacagccattgcagaaggtcttgctcaaagaattgcaaatggtgatgtccctgaaacc
attgaggggaagaaggtgataaccctagacatgggtcttcttgttgctggcacaaaatac
cgaggggaatttgaagaaagattgaagaaattaatggaagaaataaaacaaagtgatgat
ataattttgttcattgatgaggttcacactctaattggggcaggagcagcagaaggagcc
attgatgctgctaacatattgaaaccagctcttgcaagaggtgaattacagtgtattggg
gctacaacactggatgaatatcgaaaacatattgaaaaagatccagcattggaaagacgt
ttccaacctgttaaggttccggaaccttccgttgaggaaacaattcagattctgaaagga
ttaagagaaagatatgaaatccatcacaagcttcgttatacagacgaggctgtagttgct
gctgctgagttggcacaccaatacattagtgatcggtttcttcctgataaagcaattgat
ttgatcgatgaagctggatctcgcgtgcgacttcgccatgcacagctacctgaggaagcc
agagagcttgagaaagaagttagacaaattacaaaggagaaaaacgaagctgttcgaggc
caagactttgaaaaggcaggggagctaagagatagagaaatggatctaaaaacacaaata
tccgctctaatcgacaaaaacaaagaaatgaacaaagctgagagtgaagctggcgaagcg
gggcccacagtaacagaagcagacatccagcacatcgtatccacatggaccggcatccca
gtggaaaaagtctcgagtgacgaatccaaccgcctcctaaaaatggaagacaccctccac
aaccgcatcatcggtcaagacgaagccgtgaaagccataagccgagccatccgccgggcc
cgcgtgggtctcaaaaatcccaaccgcccaattgccagcttcatcttctcggggcccacg
ggtgtcgggaaatccgaactcgcaaaatccctagccacatactatttcggctcggaagaa
gccatgattcggctcgatatgagtgagttcatggaacgacacacggtctcaaagctcatc
ggctcgccacccgggtacgtcggttacacggaaggcgggcagctgaccgaagcggtccgc
cgccgcccgtacaccgtcgtcctttttgatgaaatcgaaaaggcgcatccggatgttttc
aatatgatgcttcaaattcttgaagatggaaggttgaccgatagtaaagggcgaacggtt
gacttcaagaacacgcttttgatcatgacttcgaatgttggaagtaatgtgattgaaaaa
ggtggacggaggatcggatttgatcttgattatgatgagaaagatagtagttataatcgg
attaagagtttggttacggaagaattgaaacagtattttaggcctgagtttttgaataga
ttggatgaaatgatagtttttagacagttgacgaaattggaagtgaaggagattgcggat
ataatgttgaaggaagtgtttgagaggttaaagggtaaggaaatagatcttcaggtgact
gagaggtttagagatagggtggtggaggaagggtataaccctagctatggtgcaaggccg
ctaagaagggcgatcatgagacttttggaggatagtatggcggaaaagatgcttgcacgt
gagattaaggagggcgattccgtcattgttgatgttgatttggacggtaatgtgacggtt
cttggcggcagcggtggtgctcaaccagagatcttaccggagccgattgcattgtag
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