Lactuca sativa (garden lettuce): 111892325
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Entry
111892325 CDS
T05352
Name
(RefSeq) ADP-ribosylation factor GTPase-activating protein AGD3
KO
K12489
Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
111892325
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lsv04131
]
111892325
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lsv04147
]
111892325
Membrane trafficking [BR:
lsv04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
111892325
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
111892325
Exosome [BR:
lsv04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
111892325
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAR_3
ArfGap
Ank
PH
Ank_2
Ank_3
BAR
Ank_5
Ank_4
PH_11
PH_8
PH_20
ANK_LRRK2
PH_13
Motif
Other DBs
NCBI-GeneID:
111892325
NCBI-ProteinID:
XP_023744171
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All DBs
Position
4:complement(145479051..145485142)
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AA seq
820 aa
AA seq
DB search
MQQEAMMYFSKLDDSPMFRQQIQCLEEIAETLRERGSKFYKGCRKYTEGLTEANERDAAF
ASSLESFGGGPDPISMAFGGPDMIKFAVVLREIGTYKESLRSKIEHTLSDRLIRFTNMEL
QDIKEARKRFDKADAVYSQIRDKFLSLRKSTRTEIAAAMEEELYNARMTFEQARFNLVSA
LSSVETKKRFEIVESLGEAMDAHLHYFKQGYELLIQMQPYIQQVLLHAQKARQSYYSEQQ
TLNERVQEYKKHIDVGSRISSNISVGNGDMAQQYPRNSHKVIHAVMQSGAEGKVQNIKQG
YLSKRSSNLRGDWKRRFFVLDNRGMLYYYRKQLARPPGSGVQRGNTAEPGPGILSRWLSS
HYHGGVQDVARHTVNLLTSTIKPDAEQSDLRFCFRIISPMKIYTLQAESSLEQLDWIEKI
NGVIASLLSSQTPEMHLCTSPTSEGSLGGEIPMSQDRKTSAECSSEKDRSSRNMMRACKS
SQQLRYGGRNEKPVDALRKIVGNDKCADCGAPDPDWASLNLGVLICIECSGVHRNLGVHI
SKVRSLELDVKAWEPSVIKLFQSLGNVFANSVWEKMLTVKRSHQADDELSWRSMESDKSG
ESFGKPSCDDHISTKEKFIHAKYSEKRYIQKVKDPSHLMTLEQQLWENVRCNDKKAVYLL
IIICNADVNATYGVSITHSQDLTTVEVDHDHEYECDYLKSYSTDSSSSRSSASIKGTNDP
LTNEALDGCSLLHLASQTADCTMVELLLQHGANINACDSKGQTPLHHGIMRGRLAIVKLL
LTRGADPLAADMEGKTPRQLVSELGIDDIQLLALLRAPKR
NT seq
2463 nt
NT seq
+upstream
nt +downstream
nt
atgcagcaggaggcaatgatgtatttctccaaactcgacgattccccaatgttccgtcaa
cagatccagtgtttggaagaaattgcagagacactaagggagagaggttccaaattctac
aaaggctgtcgaaagtacacagaaggcctaacagaagcaaatgaaagggatgctgctttt
gcaagctcccttgaaagttttggtggaggacctgatcctatttctatggcttttggaggt
cctgacatgataaagtttgcagttgttttaagagaaattgggacatataaagaaagtctt
cgatcaaagattgagcatacactaagcgatagattaattcgcttcaccaatatggagcta
caagatatcaaggaagctaggaaacgttttgacaaggctgatgctgtttatagccagata
cgtgacaagtttttatcattgagaaaaagtactcgaacagaaatagctgctgcaatggag
gaggaactttataatgcaagaatgacatttgagcaagctcgcttcaatctggtttctgct
ctttcaagcgtcgaaacaaagaaaagatttgagattgtggaatctcttggtgaggcaatg
gacgcccatcttcattatttcaaacagggttatgagttgttaattcaaatgcagccttac
atccaacaggtattgttacatgcacagaaagccagacaaagctactattcagaacagcaa
acactaaacgaaagggttcaagagtacaagaaacacattgatgtgggaagcagaatatct
tctaatatttctgttggtaatggtgacatggcacaacaatatccaagaaactcccataaa
gtaatacatgcagttatgcagtctggtgcagaggggaaggttcaaaacatcaaacaagga
tacctatcaaaacgctcctcaaatttgagaggagattggaagagaagattctttgtactt
gataaccgagggatgctgtattactatcgcaagcaattagccagacctcctggatctggt
gtacagagaggtaatacagctgagcctgggcctggtatactcagcaggtggctatcttct
cattatcatggtggggtgcaggatgtggcacgccacacagtcaacttgcttacatctaca
ataaagcctgatgctgaacaatcagatttgagattttgtttcaggattatctctccaatg
aagatatacactttacaagcagaaagctcactggaacaattggattggattgaaaaaata
aacggagtaatagcttcactcttaagttcccaaacacctgagatgcatctatgtacaagt
cctacgagtgaaggtagcttaggaggagaaatcccaatgagtcaagataggaagacatct
gcagaatgtagcagtgagaaagataggagttcaagaaacatgatgcgtgcatgtaaaagc
tcacaacaattaagatatggtggaagaaatgaaaaaccagttgatgcattgagaaagata
gttggtaatgataagtgtgctgattgtggtgcacctgatccagactgggcttccttaaat
cttggagttcttatttgcattgagtgttcaggtgttcatcgcaatcttggtgttcatata
tccaaggtaagatctttggaacttgatgtgaaggcatgggaaccttctgtgattaagctg
ttccagtcattagggaatgtatttgccaattcagtatgggagaaaatgttgactgtaaaa
agaagtcatcaggctgatgatgaattatcttggagatccatggagtctgataaatcaggt
gagtcctttggaaaacctagttgtgatgatcatatatccacaaaggaaaagttcattcat
gcaaagtattcagaaaagagatacattcaaaaagtaaaagaccctagtcatctcatgaca
ctggaacaacaattatgggaaaatgtgcgttgtaatgacaagaaagcagtttaccttctt
atcatcatatgcaatgcagatgtgaatgccacttatggtgtttccatcacacactcacaa
gacctaactacagttgaggttgaccatgaccatgaatacgaatgtgactacttaaaaagt
tattctacagatagttcctcctcaagatcttcagcctcaataaaagggactaatgatccc
ttaaccaatgaagccctagatggttgttcccttcttcacttggcttcccaaactgctgac
tgtaccatggtggaactgctgttacaacatggagcaaatatcaatgcttgtgattcaaaa
ggtcaaacgccacttcatcatggtatcatgagaggccgacttgcaatcgtaaagttactt
cttaccaggggagccgatccattagcagcagacatggaaggtaaaacgccacgtcagctt
gtgtcagaattaggaattgatgatatccaactccttgcccttctacgagcaccaaagaga
tag
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