Lactuca sativa (garden lettuce): 111892570
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Entry
111892570 CDS
T05352
Name
(RefSeq) protein TRANSPORT INHIBITOR RESPONSE 1
KO
K14485
transport inhibitor response 1
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
111892570
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lsv04121
]
111892570
Ubiquitin system [BR:
lsv04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
111892570
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GFIT
Motif
Pfam:
Transp_inhibit
F-box_5
LRR_At5g56370
F-box-like
LRR_4
F-box
LRR_NXF1-5
LRR_8
Motif
Other DBs
NCBI-GeneID:
111892570
NCBI-ProteinID:
XP_023744399
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Position
5:369033104..369035922
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AA seq
580 aa
AA seq
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MGHSFPEEVLEHVFSFITSHKDRNVVSLVCKSWYEIERWCRRSIFIGNCYAVSPKMMIRR
FPEVRSVELKGKPHFADFNLVPDGWGGYFYPWISEMSRAYPWLEEIKLKRMVVTDEGLEL
ISKSFKNFKVLILSSCEGFSTDGLAAIAAHCRNLKELDLRESEVEDVSGHWLSHFPETCT
SLESLNMACLGSEVSFSALQRLVSRSPNLKTLRLNRTVPLEKLSTLLRRAPQLLQMGTGA
YSAEPRSDLYSNLLDAFSKCKNLNELSGFWDVVPSYLPAFYPVCSRLTSLNLSYATIQSP
EITKIVTQCPNLQRLWVLDYIEDTGLNALSLSCKELRELRVFPSDPFVVDANVSLTEEGL
VAVSQGCRNLQSVLYFCRQMTNSALTTIARNRPNLTCFRLCILEPRAPDYLTLEPLDTGF
GAIVEHCKGLERLSLSGLLTDRVFEYIGTRGKKLEMLSIAFAGDSDLGLHHVLSGCESLR
KLEIRDCPFGDKALLANVSKLETMRSLWMSSCLVSLGACKLLSQKMPRLNVEVIDERGDL
DSMLDAYPVEKLYIYRTVAGPRFDMPSFIRTMAVDQQPNR
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atggggcattcgtttccggaggaggtgctggagcatgtgttttcgttcataacttcacat
aaagacaggaatgtcgtttcattggtgtgcaagtcgtggtatgagatcgagagatggtgc
cggaggagtattttcatcgggaactgttacgccgtgagtccgaagatgatgatcaggagg
tttccggaggtgagatccgtggagttgaaagggaaaccgcattttgctgacttcaatttg
gtgccggatggctggggagggtatttttacccttggatctctgaaatgtctagggcttac
ccgtggttagaggagattaagcttaaacggatggtggtcacggatgagggtttggagttg
atctccaagtcttttaagaactttaaagttttgattttgtcttcttgtgagggtttcagc
accgatggacttgctgccattgccgcccattgcagaaacctgaaagaattggatttgcgt
gagagcgaggtggaagatgtaagcgggcattggctaagccatttccccgagacctgcacg
agcttagagtctctgaacatggcctgcttaggttctgaagtaagcttctcagccctccaa
cgcctcgtcagccgctcccccaacctcaagactctcagactcaatcgcactgtccctctg
gaaaagctctccaccctcctccgccgggccccacagcttctccaaatgggcacaggtgcc
tattccgctgaaccccgatccgatctctattcaaatttactcgacgccttctcaaaatgc
aagaatcttaatgaactttccggattttgggacgtggtcccttcttatctcccagctttt
tatcccgtttgttctcgcctcacttccttaaacttaagttatgccactatccaaagcccc
gagatcaccaagattgtcacccagtgtcctaatctccaacgtctatgggtgctggattac
atcgaggacacgggactgaatgccctttcgttgtcctgtaaggagttacgcgagctgaga
gttttcccttcggatccgtttgttgttgatgcaaatgtatcattaacagaagaaggtctg
gttgcggtttcccaaggctgcagaaacctccaatctgttctctacttctgtcgccagatg
acaaactctgcattgaccaccattgctagaaaccgccctaacctaacctgctttcggtta
tgcatcctggagccacgggccccggactacctaacactggaaccactcgacacagggttc
ggagccattgtagaacactgcaaaggacttgaacggctttcgttatcgggtcttttaaca
gaccgtgtgtttgagtacatcgggacgcgtggtaagaagctggagatgctttccatcgcg
tttgctggggatagtgatttagggctgcatcatgtgttgtctgggtgtgagagtcttcgg
aagcttgagatacgcgattgcccgtttggggataaagctttgttggcgaatgtttccaag
ttggagacaatgcgatccctttggatgtcttcgtgtttggttagtcttggggcgtgtaag
ttgctgagtcagaagatgcctcgtcttaatgtcgaggttattgatgaacggggtgacttg
gattccatgctggatgcttatcctgttgaaaagctttatatataccggactgttgcgggc
cccaggttcgacatgcctagctttattcggaccatggctgtggatcaacaaccaaatcgg
taa
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