Lactuca sativa (garden lettuce): 111892602
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Entry
111892602 CDS
T05352
Name
(RefSeq) telomere repeat-binding factor 4 isoform X1
KO
K09422
transcription factor MYB, plant
Organism
lsv
Lactuca sativa (garden lettuce)
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lsv03000
]
111892602
Transcription factors [BR:
lsv03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-factors
111892602
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Linker_histone
Myb_DNA-binding
Myb_DNA-bind_6
HTH_Hrp3
FAM110_N
CHDCT2
Motif
Other DBs
NCBI-GeneID:
111892602
NCBI-ProteinID:
XP_023744424
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Position
5:300398895..300401358
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AA seq
282 aa
AA seq
DB search
MGNPKQKWTAEEEEALRAGVAKHGTGKWKNIQKDPEFNHFLYSRSNIDLKDKWRNMSVSA
NGQGPREKSRTPKPKATTDSPATAIPLAITWTPGSSAAAVVDPASTDVQMDDSSKCLLDG
KTASKYNTMIYEALSTLKDPNGSDTSAIVSFIEKRHEVPQNFRRLLSSRLRRLVAQEKLE
KVQNCYRLRRESANGTKGPISKPKEIRPRISQVNSYLGGTLEEAAVAAAYQVAEAENKSF
VAAEAVKEAERVSKMAEEAEAFLQLAKEIYERCSRGEVVMVA
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atggggaatccaaagcagaagtggacggcggaggaagaagaagctctacgcgctggcgtt
gcaaaacacggaaccggtaaatggaagaacatccagaaagatcccgagttcaaccacttc
ctatattctcgctccaatatcgatctcaaggataaatggcggaatatgagtgtcagtgca
aatgggcaaggtccaagggaaaaatcaagaacaccaaaaccaaaagctaccacagattca
cctgctactgctattcccttagccattacatggactcctggttcttcagctgcagctgta
gttgatccagcatctacagatgtgcaaatggatgattcttcaaaatgtctgttagatgga
aagacagcttcaaagtacaatacaatgatctatgaagcactgtcaaccctaaaagatcca
aatgggtcagacaccagtgcaattgtcagtttcattgagaaaaggcatgaggtgccacaa
aattttaggaggttattaagttcaaggctaagaaggcttgttgcgcaagaaaaacttgaa
aaggtccagaactgctatcgacttcgaagggagtcagcgaatggaacaaagggcccgatt
tcaaaaccgaaagagattcgaccgagaatatctcaagtcaacagttatcttggtgggaca
ttagaagaagcagcggttgctgctgcgtatcaagttgcagaagcggaaaacaaatcgttt
gtagcagcagaagctgttaaagaggcagaaagagtctccaaaatggccgaagaagcagaa
gcatttttacagctcgccaaagagatttacgagagatgttcgcgtggcgaagtggtgatg
gtggcgtag
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