Lactuca sativa (garden lettuce): 111892652
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Entry
111892652 CDS
T05352
Name
(RefSeq) eukaryotic initiation factor 4A-8
KO
K03257
translation initiation factor 4A
Organism
lsv
Lactuca sativa (garden lettuce)
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lsv03019
]
111892652
03012 Translation factors [BR:
lsv03012
]
111892652
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lsv04147
]
111892652
Messenger RNA biogenesis [BR:
lsv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
111892652
mRNA cycle factors
Stress granule specific factors
111892652
Translation factors [BR:
lsv03012
]
Eukaryotic type
Initiation factors
eIF-4
111892652
Exosome [BR:
lsv04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
111892652
Exosomal proteins of bladder cancer cells
111892652
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
Flavi_DEAD
DUF2780
Motif
Other DBs
NCBI-GeneID:
111892652
NCBI-ProteinID:
XP_023744473
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All DBs
Position
5:300457750..300460280
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AA seq
413 aa
AA seq
DB search
MAGVLSDGSQFDARQYDSKMNDLLSADGQDFFTSYDEVYDSFDAMGLQENLLRGIYAYGF
EKPSAIQQRGIVPFTKGLDVIQQAQSGTGKTATFCSGILQQLDYNIIECQALVLAPTREL
AQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILSAGVHVVVGTPGRVFDMLRRQSLRP
DYINMFVLDEADEMLSRGFKDQIYDIFQLLPSKVQVGVFSATMPPEALEITRKFMNQPVR
ILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMR
SRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQP
ENYLHRIGRSGRFGRKGVAINFVTREDERMLFDIQKFYNVVVEELPSNVADLL
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atggcaggtgtcttatccgatggctctcagtttgatgctcgtcaatatgattcaaagatg
aatgatttgctttcagctgatggacaagattttttcacttcatatgatgaagtttacgac
agttttgatgccatgggtttgcaagaaaacctcttgaggggcatttatgcatatggattc
gaaaaaccatcagcaatccaacaaagaggaatcgtacccttcacaaagggtctggatgta
atccaacaagctcaatcaggaactggaaaaactgcaactttttgctcgggaatccttcaa
caactcgattacaacataatcgaatgccaagctttggttttagcacctactcgtgaactc
gcacaacagattgaaaaagttatgcgtgcattaggggattatcttggtgtaaaagtccat
gcttgtgttggtgggaccagtgttcgtgaagatcaacggatactttccgccggagttcat
gtcgtcgtcggaactcctggccgtgtttttgatatgctacgaagacaatctcttcgtcca
gattacatcaacatgtttgtgcttgatgaagctgatgaaatgctttcacgaggcttcaaa
gatcagatctatgatatatttcagctacttccgtcaaaggttcaagtcggggtgttctcc
gccacaatgccgccggaagccttagaaatcacaaggaaattcatgaaccaacctgttcgg
attctggtgaagcgcgatgagcttactttagaagggatcaagcaattctacgtgaacgtc
gaaaaggaggaatggaagctcgaaacactctgcgatctgtacgaaactttagcgatcact
caaagtgttatcttcgtgaacactcgacggaaggtggattggctgacggacaaaatgcgc
agccgtgaccacaccgtctccgccacgcacggcgatatggatcagaacacgagagacatt
attatgcgggaattccgttctggatcatcgcgagtcctcatcaccaccgatctgttggct
cgtggaatcgatgtgcagcaagtttcgcttgtgattaactacgatcttccgacgcagccg
gagaattatctccaccgtatcggacgtagtggccggtttgggcgaaagggtgttgcgatc
aattttgtgaccagagaagatgagagaatgctttttgatatccagaagttttacaatgtc
gttgtggaggagcttccatcaaatgtcgcggatctgctctga
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integrated database retrieval system
