KEGG   Lactuca sativa (garden lettuce): 111892765
Entry
111892765         CDS       T05352                                 
Name
(RefSeq) RING-H2 finger protein ATL78
  KO
K19040  E3 ubiquitin-protein ligase ATL10/75/76/77/78 [EC:2.3.2.27]
Organism
lsv  Lactuca sativa (garden lettuce)
Brite
KEGG Orthology (KO) [BR:lsv00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:lsv04121]
    111892765
Enzymes [BR:lsv01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     111892765
Ubiquitin system [BR:lsv04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   ATL proteins
    111892765
SSDB
Motif
Pfam: zf-RING_2 zf-RING_11 zf-rbx1 zf-C3HC4_2 zf-C3HC4 zf-ANAPC11 zf-RING_5 zf-C3HC4_3 zf_RING_Vps8_fungal zf-RING-like zf-RING_UBOX FANCL_C zf-RING_4 Gemini_mov Prok-RING_1
Other DBs
NCBI-GeneID: 111892765
NCBI-ProteinID: XP_023744588
LinkDB
Position
4:292002451..292003810
AA seq 223 aa
MSRLTTELFENEMRHFISRKLLLHTYSYQQPAAAVTAPSPSSPYTEHNNFDANVVMVLSV
LICALICSLALHSIIRCVLRCTGFSSSESSGSQETTLVKANTGIKKKALKSFPTVSYWEG
LKLTGLNKECVICLGDFSTGERVKILPKCNHGFHVRCIDKWLSSHSSCPTCRNSLLETCQ
NFVTGGKCSSSMSSQLQEQGPSNTTILTILPLSHEGLVRNYET
NT seq 672 nt   +upstreamnt  +downstreamnt
atgtcaagactgactactgagctctttgagaatgaaatgaggcattttatttcaagaaaa
cttctacttcacacttattcataccaacaaccagcggctgctgtgacagctccgtcaccg
tcaagcccatatacagaacataacaactttgatgcgaatgtggtgatggtgctgtcggtg
ctgatatgcgctctgatttgctcactagcgttgcactccatcatcaggtgtgtattaaga
tgcacgggattctctagttcggaaagtagcggtagccaggaaacaactttagttaaagcc
aacactggaatcaagaaaaaagcattaaagagtttcccaacagtcagctattgggaagga
ctgaagctaacaggattgaacaaagaatgtgttatatgcttgggtgacttttcaacagga
gagcgagtaaaaatactgcccaagtgcaaccatggatttcatgtgcgttgcatcgataaa
tggctgagttcacattcatcttgtccaacttgcaggaactccttacttgaaacatgtcaa
aactttgtcacaggtgggaaatgtagcagcagtatgtcttcgcaactgcaagagcaaggt
ccaagtaatacaactattttaaccatattgcctctgtcgcatgaaggtcttgtacgaaat
tatgagacgtga

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