Lactuca sativa (garden lettuce): 111892771
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Entry
111892771 CDS
T05352
Name
(RefSeq) RING-H2 finger protein ATL78
KO
K19040
E3 ubiquitin-protein ligase ATL10/75/76/77/78 [EC:
2.3.2.27
]
Organism
lsv
Lactuca sativa (garden lettuce)
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lsv04121
]
111892771
Enzymes [BR:
lsv01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
111892771
Ubiquitin system [BR:
lsv04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
ATL proteins
111892771
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-rbx1
zf-C3HC4_2
zf-C3HC4
zf-ANAPC11
zf-C3HC4_3
zf-RING_5
zf-RING_UBOX
zf-RING_16
zf-RING-like
FANCL_C
zf_RING_Vps8_fungal
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
111892771
NCBI-ProteinID:
XP_023744592
LinkDB
All DBs
Position
4:292512139..292513093
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AA seq
229 aa
AA seq
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MLTSSMMLFQANFVNHHSRKLLLDAPMYLHASTTMRTTVDAIAASPTPSTDTANKSFDAN
VVMVLSVLLCALICSLGLNSIIRCVLRCSNLVHSESNTSQESTPARLANTGIKKKALKTF
PVVSYWEGLKLPGLGKECVICLSEFIVEEQVKILPKCNHGFHIRCIDKWLSSHSSCPTCR
HSLIETCQKILSGGACNSTTPFQGQNPSGVNIISLAPLQPERFVRSYEM
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
atgctcactagctccatgatgctttttcaagccaactttgtgaatcatcattcaagaaaa
cttctacttgatgctcctatgtacttacatgcgtcaacaacgatgagaacaacagtggat
gcaatagcagcttcaccaacaccaagtacagatacggcaaacaaaagctttgatgcaaat
gtggtcatggtgctatcagtgcttctctgtgctctcatttgctccttagggttgaactcc
ataatcaggtgtgtattaagatgttcgaatttagttcactctgagtcgaatactagccag
gaaagcactccagctaggttagccaacactgggattaagaaaaaggcattgaagactttc
ccagttgttagctattgggaagggctgaaattacctggattaggcaaagaatgcgtgata
tgcttaagtgagttcatcgtagaagaacaagtcaaaattctgccaaaatgcaaccatgga
ttccatattcgatgcatcgataagtggttgagttcacactcctcctgcccaacttgtagg
cactccctcatagaaacatgccagaagatattgtcaggtggggcatgtaacagtacaaca
ccatttcaaggacaaaatccaagtggtgtcaatattataagcctcgcgcctttacaacct
gagcgttttgtacgaagctatgaaatgtag
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