Lactuca sativa (garden lettuce): 111892831
Help
Entry
111892831 CDS
T05352
Name
(RefSeq) syntaxin-52
KO
K08503
syntaxin of plants SYP5
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
111892831
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lsv04131
]
111892831
Membrane trafficking [BR:
lsv04131
]
SNARE
SNAP-25[C] (Qc)
STX8
111892831
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNARE
NPV_P10
STX6_10_61_N
CLZ
NET2A_C
Motif
Other DBs
NCBI-GeneID:
111892831
NCBI-ProteinID:
XP_023744642
LinkDB
All DBs
Position
9:complement(164051952..164053858)
Genome browser
AA seq
232 aa
AA seq
DB search
MASSSDPWTREYNEASKLADDITSMISERSSFGSGPEAQRHSSAIRRKITILGTRLDSLQ
SLLTKLPAKQPLTEKEMNRRRDMLGNLRTKVTQMATTLNMSNFANRDSLLGPDIKPADAM
SRIAGLDNSGVVGLQRQIMREQDEGLEKLEETVISTKHIALAVNEELDLHTRLIDDLDEH
VEVTDSRLKRVQKNLAILNKRTKGGCSCLCLLLSVIGIAVLVVALYMIIKYL
NT seq
699 nt
NT seq
+upstream
nt +downstream
nt
atggcttcttcatcggatccatggacgagggaatataatgaagcctctaagcttgctgat
gatatcaccagcatgatatcagagaggagttcctttgggtcaggcccagaagcacagcgc
cattcatctgctattcggagaaaaatcaccatacttggaaccagacttgatagcttacag
tctcttctcacaaagcttcctgctaaacaacccttgacagagaaagaaatgaacagacgc
agagatatgcttggaaatttgagaacaaaggtaacacagatggccaccacattgaacatg
tcaaactttgctaatagggacagcttgcttgggccagatattaagccagctgatgccatg
agcagaattgctggtttggataactctggtgttgttgggcttcaaagacaaatcatgaga
gaacaagatgaaggcttagagaaactggaagagacagtgataagcaccaaacatattgct
ttagctgtcaatgaagaacttgacctgcacactagactcattgatgatctggatgaacat
gtagaagttacagattctcgactcaagagagtgcagaagaatttggcgattctaaataaa
cgaacaaagggtggttgctcatgcttgtgcctactgttgtcagtgattggaattgctgtc
ttggttgtggctctttatatgatcataaaatacttgtga
DBGET
integrated database retrieval system
