Lactuca sativa (garden lettuce): 111892881
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Entry
111892881 CDS
T05352
Name
(RefSeq) splicing factor-like protein 1
KO
K13095
splicing factor 1
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111892881
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lsv03041
]
111892881
Spliceosome [BR:
lsv03041
]
Complex A
Other components
Complex A specific factors
111892881
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SF1-HH
KH-I_KHDC4-BBP
RRM_1
KH_1
KH_12
zf-CCHC
eIF3g
KH_PNO1_2nd
RRM_5
Tuftelin_like
PHD_4
zf-CCHC_2
Motif
Other DBs
NCBI-GeneID:
111892881
NCBI-ProteinID:
XP_023744711
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Position
3:complement(975013..978485)
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AA seq
763 aa
AA seq
DB search
MDSLPPETLAPTPTPYDALDYTKNSSNQHPPPDFGSAPPPPPPPSDSDHNFSHQLQIVCQ
TDPKPDTTDPKPDNGGVRSVTTEKDNSGVEEDTTSRRRRRSRWDPPPTDGDADQNGGKKR
KSRWADDEPKPVFQLPDFMKDFTGGMDMDPEIQALNARLMEISRILQSGQQLDDRPEGAR
SPSPDPIYDNMGTRINTREFRARERLNRERQEIISQIIKRNPAFKPPADYRPPKLQKKLY
IPMKEYPGYNFIGLIIGPRGNTQKRMEKETGAKIVIRGKGSVKEGRFGQKRDLKFDPSEN
EDLHVLVEAETQEGLEAAAGMVEKLLHPVDEGLNEHKRQQLRELAALNGTIRDDEYCRLC
GEPGHRQFACPSRMSTFKSDVLCKICGDGGHPTIDCPVKGTAGKKMDDEYQNFLAELGGT
LPEGVTKQSTPLPIMGSSTSNPPWAPSTNGGGSSSTGTSAHPGLGSNVAKPGVGFGLGLG
IGKEIDDTNLYIGYLPPTFEDDALIRLFSPFGEIVMAKVIKDRVTGLSKGYGFVKYSDIS
QANQAIASMNGYRLDGRVIAVRVAGKPPQPTVPPGPPAPTYPGGYPSQQMTAPPPGSYMT
APVPWGPPPPPPPPPYAAYAPPPPPPPPGSSMYSSYPSQQQIPSYGVQYPPPPPPPPPQN
KSVITSTTTTTTNTEAQAQQSYPNNMNAPPAQSPSQSSNVYGTTTTTPNTQTAYPYSSYY
TQSVVEQQSFAAAPWSLNLSADQTQQTTYGTDPEYDKFMAEMK
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atggattctcttccccccgaaaccctagctcccactcctactccctatgatgcgttggat
tacaccaagaactccagtaaccagcatccgccgcctgattttggctcagcacctccaccc
ccgcccccgccgtccgattccgaccacaatttttctcatcaacttcaaatcgtatgtcaa
acggatcccaagccagacacaacagatccgaagcctgataatggcggcgttaggagtgtt
actacggaaaaggataactctggcgtggaggaggatacaacaagcaggagacggaggcgg
agcagatgggacccgcctcctaccgatggagatgctgatcagaatgggggtaaaaagagg
aagtctcgttgggcggacgacgagccgaaacccgtgtttcagttgccggatttcatgaag
gattttactggaggtatggatatggatcctgaaattcaggctttgaatgcaaggcttatg
gaaattagtagaattttacagtctggacaacagttagatgatcgtccggaaggtgctagg
tctccttcgccggacccgatatatgataatatgggaaccagaataaacactagagaattt
agggcgagggaaaggcttaacagagagagacaagagattatttcgcagattattaaaaga
aatcctgcgtttaagccccctgctgattataggcctccgaagcttcagaagaagctgtat
ataccaatgaaagaataccctggttataattttatcggacttataattgggccgagaggt
aatacgcagaagaggatggaaaaggagactggagctaaaatcgttatacgggggaaaggc
tcagtgaaagaaggcaggtttgggcaaaagcgtgatttgaagtttgatccttctgaaaac
gaagatttacatgttttagtggaagcagagacacaggaagggcttgaagctgcagcaggg
atggtggaaaagctattgcatcctgttgatgaaggattgaatgaacataaaagacagcag
ctgcgtgaacttgctgctctgaatggaacaataagagacgacgagtattgtagattgtgt
ggtgaacctgggcatcgtcaatttgcctgcccctcccgcatgtcaacttttaagagcgat
gtgttgtgtaagatctgtggagacggaggacacccaaccattgattgccctgtgaaaggg
actgcaggaaagaaaatggatgatgagtatcagaatttcttggcagaacttggcgggacc
cttccagaaggtgtcaccaagcaaagcacaccattgccaatcatgggttcttccacgagc
aatccaccatgggcacccagcacaaacggaggaggaagcagtagtacaggaacatctgca
catccgggtctaggaagcaatgtagcaaaaccaggagtcggttttggtcttggtcttgga
attggtaaagaaatcgatgataccaatctgtatatcgggtacctgcctccgactttcgaa
gatgatgccctgattcggttgttttcaccatttggggagatagtaatggcaaaggtgatt
aaagacagggtcactgggctgagcaaaggttatggttttgtcaagtattctgatatatct
caggccaatcaagccattgctagcatgaatggttatcgtctggatggaagagtaattgca
gtaagagttgcaggaaagccaccccaacctactgtaccccctggtcctcctgcgcccact
tatcctggcgggtatccatctcagcagatgactgcgccaccgcctgggagttatatgact
gccccagttccatggggaccaccaccaccgcctcctcctcctccttatgctgcttatgct
cctcctccgcctcctcctcctcctggatcgagcatgtattcatcctacccaagccaacaa
cagatcccctcttatggtgttcaatatcctcctcctcctcctcctcctccacctcagaac
aagagcgttattacatcaactactactactactactaatactgaggcccaagcccaacaa
agctacccaaataatatgaatgcacctcctgcacagtccccatcccagtctagtaatgtt
tatgggacaacaacaacaacaccaaacacccaaactgcatatccttactcttcttattac
actcagtcagtagttgagcagcaaagttttgcagctgcaccctggtctttaaatctctct
gcagaccaaactcagcaaactacttatggcacagaccctgagtatgacaagtttatggct
gagatgaaatga
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