Lactuca sativa (garden lettuce): 111892938
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Entry
111892938 CDS
T05352
Name
(RefSeq) uncharacterized protein LOC111892938
KO
K14536
ribosome assembly protein 1 [EC:3.6.5.-]
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
111892938
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lsv03009
]
111892938
Ribosome biogenesis [BR:
lsv03009
]
Eukaryotic type
Pre-60S particles
GTPases
111892938
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
EFG_C
EFL1
EFG_III
EF-G_D2
GTP_EFTU_D2
SRPRB
EFG_IV
Motif
Other DBs
NCBI-GeneID:
111892938
NCBI-ProteinID:
XP_023744779
LinkDB
All DBs
Position
8:complement(34108282..34111731)
Genome browser
AA seq
1013 aa
AA seq
DB search
MDDSYDCRNIRNICILAHVDHGKTTLADHLIASSGGGVLHPKQAGRLRFMDYLDEEQRRA
ITMKSSSIGLQYKGYAINLIDSPGHMDFCSEVSTASRLSDGGLVLVDAVEGVHIQTHAVL
RQAWIEKLTPCLVLNKIDRLIVELKLSPLEAYNRLQRIVHEVNSIVSTYKSEKYLSDVDS
ILAGPAGEVSDENQEFIEDDEEDAFQPQKGNVVFACALDGWGFSICEFAEFYASKLGASS
SILQKALWGPRYFIPKTKMIVGKKGLSSGSKARPMFVQFVLEPLWQVYEAALDTNGDKGI
LEKLIKSFHLSIPPRELQHKDPKYVLQSVMSRWLPLADAILSMVVKHMPDPIAAQSFRVS
RLLPKREILDYSIGDSEVVAEAELVRKSVEACDSQPDSPCVAFVSKMFAVPMKMLPQRDV
NGDLLSNYTEESGSGDSDECFLAFARIFSGVLHSGQKVFVLSALYDPLKGADSMQKHIQE
AELHSLYLMMGQGLIPVASARAGNVIAIRGLGQHILKSATLSSTKNCWPFSSMTFQVSPT
LKVAIEPSDPADMAALMKGLRLLNRADPFVEVSVSARGEHVLAAAGEVHLERCIKDLKER
FAKVNLEISPPLVSFRETIERESLNPFEKLKSLSVSSNFIERATPNGRCTVRVHILKLPD
ALTKLLDESSDLLEAIIAGKAIQVKTMGGQDDDHPVEALRKRIWDAIESEVSDENAEKNK
TLWENLLKRIWALGPRQVGPNMLLLPDSTTKETGSSVLIRSSPYVSERLGFTEASNFDEV
EIENQSLIEEAKSLRSSVLSGFQVATAAGPLCDEPMWGLAFMIEASILPFESETEAIHQQ
SQSDQYGVFSGQVMTAVKEACKAALLQKNPRIVEGMYFCELNTPTEYLGPMYAVLARRRA
RILKEEMQEGSPLFTVHAYVPVAESFGFADELRRWTSGASSALLVLSHWEAVPEDPFFVP
KTEEEKEEFGDGSSVLQNTARKLIDGVRRRKGLPVEEKVVQYATKQRTLARKV
NT seq
3042 nt
NT seq
+upstream
nt +downstream
nt
atggatgattcttatgattgtcggaacatccggaatatatgcattcttgctcatgttgat
catggaaagactactcttgctgatcacctgattgcctcgtctggaggtggggttctccat
cccaaacaagctggtcgccttcggtttatggattatctagacgaagaacaaaggcgcgcg
ataacgatgaagagctcctcaattggtcttcaatacaaaggttatgcgataaaccttatt
gattcgcctggccatatggacttttgtagtgaggtttctactgcttcacgtttgagcgat
ggcggtttggttttggtagatgctgttgaaggagttcacattcagacacatgctgttttg
cgccaggcatggatcgaaaaacttacaccctgtttggttttgaataagattgatagattg
attgttgagctgaagttgagtcccttggaggcttataatcgtctccaaagaatcgttcat
gaagttaacagcatagttagtacttacaaatctgaaaagtacttatcagatgtcgattca
attcttgctggccctgctggtgaggtaagtgatgaaaatcaggagttcatagaggatgat
gaagaagacgcgtttcaacctcaaaagggaaatgttgtgtttgcttgtgcattggatggg
tgggggtttagcatttgtgaattcgcagagttttatgcttctaaactcggtgctagttct
tccattttgcaaaaggcgttatggggtcctagatacttcattccaaaaacaaagatgatt
gtgggtaagaagggactgtcttctggaagtaaagctcgccctatgtttgtgcagtttgtg
ctcgagccactatggcaagtctatgaagcagccttggatacaaatggggataaagggata
cttgagaagctaatcaaatcgtttcatttatctatacctcctcgtgaactgcagcacaaa
gatcctaaatatgtccttcaatctgtaatgagcaggtggcttcctttggctgatgctatt
ttatcaatggtggttaaacatatgccagaccccattgctgcacagtcctttcgcgtctcc
cgcctcctccctaaaagagaaatcttggattattctattggtgattctgaagtggttgca
gaggctgaactcgtgaggaaatcagttgaggcttgcgattcacaacctgattctccttgt
gtagcttttgtatctaaaatgtttgcagttcctatgaagatgttacctcagagagacgta
aatggtgatctcttgagtaattatacagaagaaagtggaagtggagactctgatgagtgc
ttcctggcatttgccaggatctttagtggggttcttcattcaggtcagaaggttttcgtg
ctatcagctttgtatgatccacttaaaggtgcagattcaatgcagaagcatattcaagaa
gctgagttgcattcactgtatctgatgatgggtcaaggcttaataccagtggcatctgct
agagcagggaatgtgattgccattagaggattaggtcaacatatattaaaaagtgctact
ctttcatcaacaaagaactgttggcctttttcaagtatgacattccaggtttcacctact
ctaaaagttgcaatcgagccttctgatcctgctgacatggctgcacttatgaaagggctt
aggcttttaaaccgagcagacccttttgtagaggtgagtgtgtctgctagaggggaacat
gtccttgctgctgcaggtgaagttcatcttgaaagatgcattaaagatttgaaagagagg
ttcgcaaaggtaaatcttgaaatttcacctcctcttgtgtcttttagagaaaccattgaa
agggaatctttaaacccttttgagaaactaaaatctttaagtgtgagttctaattttatc
gaaagagccacaccaaatgggaggtgtacagttcgtgtccatattttgaaacttccggat
gcacttactaagttactggacgaaagttcagaccttctagaagctatcatagcaggtaaa
gcaatacaggtgaaaacaatgggaggtcaagatgatgatcatccagttgaagcacttagg
aaacgcatttgggatgcaatagagagtgaagtttcagatgagaatgctgaaaagaataaa
actttatgggagaatcttttaaaaagaatctgggcattaggtccgagacaagtgggtccc
aacatgctgcttcttccagattcaaccacaaaagaaacaggttcttctgttctgataaga
agctctccttatgtatctgaaagattaggcttcacagaggcttctaattttgatgaagtt
gaaatcgagaaccaatcactgattgaggaagcaaagagtctgagaagcagtgtgttatcc
gggttccaagtagccactgcagcgggcccactgtgtgatgaaccaatgtggggcttagca
ttcatgatagaagcttcaattctcccatttgaaagtgaaaccgaagccattcatcagcaa
tctcaatcagatcaatacggggtgttttcagggcaagttatgactgctgtaaaagaagct
tgtaaagcagctttacttcagaaaaaccctagaatcgttgaagggatgtatttctgtgaa
ttaaacacaccaacagagtatttaggacctatgtatgctgttcttgcacgtaggcgtgct
agaatcttgaaggaggaaatgcaggaaggatctccattgtttacagttcatgcttatgtt
ccagttgcagagagttttggttttgctgatgagttgagaagatggacttctggtgcttcg
agtgctcttcttgttcttagtcattgggaagcagttcctgaagatcccttttttgtaccc
aaaacagaagaagaaaaagaagaatttggagatgggtcaagtgttttacagaatacagca
agaaagttgattgatggtgttaggaggcgtaaggggttacctgttgaggaaaaagttgtt
caatatgctacaaaacagagaactttggctcgtaaagtttag
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