Lactuca sativa (garden lettuce): 111893061
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Entry
111893061 CDS
T05352
Name
(RefSeq) auxin response factor 18
KO
K14486
auxin response factor
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
111893061
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GFIT
Motif
Pfam:
Auxin_resp
B3
AUX_IAA
Motif
Other DBs
NCBI-GeneID:
111893061
NCBI-ProteinID:
XP_023744906
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Position
6:41556464..41559707
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AA seq
658 aa
AA seq
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MITFMDSKEKLKETERCLDSQLWHACAGSMIQMPAVNSKVFYFPQGHAEHATGNVEFRER
NSQSRVPAWIPCRVSSVKFMADVDTDEVYAKIRLIPVSGSGEFSSFDDEDTSSQNGGGSS
EGQVKPSSFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYSADPPVQTILAKDVHGDTWK
FRHIYRGTPRRHLLTTGWSTFVNHKKLVAGDSIVFLRAENGELCVGIRRAKRGIGGGQEI
SSGWNPAGGNSVVPYGGYSPVMRNGTGNGNGNPFGKVKVEADCVIQAVKQATTGNPFEIV
FYPRASTPEFCVKASLVKNAMQIRWSPGMRFKMPFETEDSSRISWFMGTISSIQVSDPIR
WPDSPWRLLQVTWDEPDLLQNVKRVNPWLVELVSTMPATIHMSPFSPPRKKCRPTQHPDF
PLDPQIPIPALCGPHSHLFGGPTTGPFGYHLPDNLNPHHPASMQGARHTRYGLSLSDIQL
NNKLNSGFFPTTKPLINPFPNKPTGLGSGSEPVSCLLTIGNSVSGSKEPETPKKSRFLLF
GQPILTEQQISQSGPGSSSGLSPGQNLENDLNMETGHCKVFMESEDVGRTLDLSLLDSYE
ELCQKLGNMFKTGSSIIMNRVHYWDIKGTLKHIGDEPFGEFMKTARRLTIVTDSSNGN
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atgattactttcatggattcaaaagagaaattgaaagaaactgagagatgcttagattct
cagttatggcatgcgtgcgccggaagcatgattcaaatgccggcggtgaactcgaaagtg
ttttattttcctcaaggccacgccgaacatgccaccggaaatgtcgaattccgggagaga
aacagtcagtcgagggttccggcgtggatcccatgtcgagtttcttctgttaaattcatg
gcggatgtggataccgatgaagtttatgcaaaaatcaggttgattccggtgagtggttcc
ggcgaattcagttcttttgatgatgaagatacgagttctcagaacggcggaggatcatcg
gagggccaagttaaaccgtcgtcgtttgcaaagacattgacacaatccgacgccaataac
ggcggcgggttttccgttccaaggtattgcgccgaaacgatattcccacggttagattac
tcagcggacccaccggtgcaaaccattctcgctaaagatgttcacggcgacacatggaaa
ttccggcacatctaccgaggaactccacggcggcatttactcaccaccggatggagcaca
ttcgtaaaccataagaaacttgtcgccggagactccattgtttttcttcgagctgaaaac
ggtgaactctgtgttggaatccgacgagccaagaggggaatcggcggtggacaggaaatc
tcctccgggtggaatccggcaggcggcaactctgttgttccgtatggtggatactcgccg
gtgatgagaaacggaaccggaaacggaaatgggaatccgtttgggaaggtgaaagtggaa
gccgattgtgtaatccaagctgtaaaacaagcaaccaccggaaacccatttgagatcgtc
ttctacccaagagcaagtacgccggagttttgtgtaaaagcttccctcgtgaagaacgca
atgcagatccggtggtctccggggatgagattcaagatgccatttgaaacagaagattct
tcaagaatcagttggtttatgggaacaatttcttcaatccaggtttctgatccgattcgg
tggcccgattctccatggagacttttacaggtgacatgggatgagccggatttacttcaa
aatgtgaaacgagtgaatccatggctggtggaattggtatcaacaatgccggcaaccatt
catatgtcaccattttcaccacctagaaagaaatgtagacctacccaacacccggatttt
cccctcgatccgcaaatcccgattcccgcgctttgtgggccccactcgcacctatttggc
gggccaacaaccggcccgttcggttaccacctcccggataatttgaaccctcatcatcct
gctagcatgcagggagccaggcacacgcgttatggtttatctctctcagatatccaactc
aataacaaactaaactcggggtttttcccaaccacaaaaccgctaatcaacccgtttcca
aacaaacctactgggctgggatctggatccgagcccgtttcgtgtctgttaaccatcggg
aactcagtttcaggctcgaaagagcctgaaacccctaaaaagtctcggtttttactcttt
ggtcaaccgattttaactgagcaacagatctcccaaagtgggccagggtctagctcaggc
ctttcgccgggacaaaacctggagaatgacctgaacatggagacaggtcattgcaaggtt
tttatggagtcagaagacgtgggtcgaaccctcgacctctctttgctcgattcgtatgaa
gaattatgtcaaaaattgggtaatatgtttaaaaccggaagctctataattatgaaccgt
gttcattattgggatatcaaaggaaccctaaaacatataggagacgaaccatttggtgag
tttatgaagacagcaagaaggctaacgattgtaacggattcaagcaatggaaattaa
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