Lactuca sativa (garden lettuce): 111893097
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Entry
111893097 CDS
T05352
Name
(RefSeq) protein CNGC15b
KO
K05391
cyclic nucleotide gated channel, plant
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
111893097
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lsv04040
]
111893097
Ion channels [BR:
lsv04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
111893097
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GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
IQ
Pkinase_fungal
Motif
Other DBs
NCBI-GeneID:
111893097
NCBI-ProteinID:
XP_023744940
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All DBs
Position
6:41485037..41487589
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AA seq
669 aa
AA seq
DB search
MSSSRRYIRFDADVETPEPNTPPLKKDDTKFTKKLSRVFSEDYAKTKNTILDPRGSTLNQ
WNQLFLIAALVSLAVDPLFFYLPIIKDGMCLDEDVTLKISLTIIRTIVDMFYAIKIYVRF
RTAYVAPSSRLLGRGELILDASSISQKYLRGEFWLDLLATLPVPQVMTWFHIVDKTEMMS
TKTSVLYLIMIQFILRLCLTFRLGSHISKQAGLVANVAWVGAAYNLVLFMLAAHVIGAMW
YLLAIERQGLCWVEICDIETECKHRYFDCVNVNLPPRVAWFPTSNVSIICADADNFQYGL
VEDSVNYNIASANFFKKYSYCLWWGLRGLSSAGQELQASPFIAETHFCILIGITGLVLFA
LLIGNMQQYLESRTKRLEEYRVKRMDTEQWMHHRHLPLEMRERVRRHDLYKWITTRGVDE
EEILRALPLDLRRDVKRYVCAELVRRVPLFDQMDERTVDAICERLKPVICTPGTCLLRED
DPTNEMLFIMRGRLDSYTTGGGRSGFLNQCEIGPGDFCGEELLTWSLDPRPKVIIPLSTR
TVTAISEVEAFALTSKDLKFVATQFRKLHSKKLRHTFRVHSHQWRTWAACFIQAAWKRYK
RRKEAAMLKAKEGSGVHDIKKKTKSGRMLSGLSILATSMRAGRAFDADDVIRSPVPKPKD
PEFLDDDNH
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atgtctagctctagacgatatatcagatttgatgctgatgtggaaaccccagagccaaat
actccacccttgaaaaaagacgatactaaatttacaaaaaagctttcaagagtgttctca
gaagactatgcaaaaaccaaaaacacaattcttgatcctcgaggatcaactttgaatcaa
tggaaccaactctttctaatcgcagctcttgtttcacttgctgtagaccctctcttcttt
tacttgcctataatcaaagatggaatgtgtctagatgaagatgttaccctcaagatatcc
ctcactatcatacgtacgattgttgatatgttttatgcaatcaagatttacgttcggttt
cgtacagcttacgtggcaccttcttcccgcttacttggaagaggagagctcattcttgat
gcttcaagtatttctcaaaagtatctaagaggtgaattttggctcgacctcttggccaca
cttcctgtaccacaggtgatgacttggttccacattgtggataaaaccgagatgatgagc
acaaaaacaagcgtcctatacttaatcatgattcagttcattctaaggctttgtcttaca
tttagattagggtcgcatatatcaaagcaagccggtcttgtggctaatgtagcttgggtt
ggggctgcttacaatctcgttcttttcatgttggctgctcatgttatcggagcaatgtgg
tatcttttagccattgaaagacaagggttatgttgggtggaaatatgtgatattgaaacc
gaatgtaaacatagatatttcgactgtgttaatgtcaatctccctcctcgagtagcatgg
ttcccaacgagcaatgtgtccattatatgtgcagatgctgacaactttcagtacggattg
gttgaagattcagtgaactacaatattgcttctgcaaatttctttaagaagtattcatat
tgtctctggtggggcctccgaggtttaagttcagcaggacaagaacttcaagcgagtcca
tttatagcagaaacacacttttgcatacttatcgggatcaccgggttggtgttattcgcg
ttgctgattggaaacatgcaacaatacctggagtcgagaacaaaacgattagaggagtac
agggtgaaacgaatggatactgaacaatggatgcaccacagacacctgccactcgaaatg
agagaacgtgtacgcagacatgatctttacaaatggattacaactcgtggggttgatgaa
gaagagattcttcgagcacttccattagatctccgaagagacgtcaaacgttatgtttgt
gctgagttagtcagacgggttcctttatttgatcaaatggatgaacgaacagtggatgcg
atatgtgagagattaaagcctgtgatatgcacaccggggacttgtttacttcgagaagac
gatccaacgaacgagatgttgtttataatgcgaggtcggttagattcctacaccaccggc
ggcggccgatcgggtttcttgaaccagtgcgagatcggtccgggagacttttgcggcgag
gaactgcttacatggtcgctggacccacgtccgaaagttatcatcccgttatccacacga
acagtcaccgccatatctgaggtggaagcttttgctcttacttcaaaagatttgaaattt
gtcgctacacagttccgaaagcttcatagcaagaaattgagacatacttttagggttcat
tcgcatcagtggaggacttgggcggcgtgttttatacaggcggcttggaaaaggtataag
cgacggaaagaggcggcgatgcttaaggctaaagagggttccggcgtccatgacattaag
aagaagacaaagagtggtagaatgctaagtggtttatcgatattggcaacaagtatgaga
gcaggtcgggcatttgatgctgacgatgtcattcgtagccctgtgccgaagcccaaggat
cctgagtttttagacgatgataatcattga
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