Lactuca sativa (garden lettuce): 111893105
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Entry
111893105 CDS
T05352
Name
(RefSeq) probable DNA helicase MCM8
KO
K10737
DNA helicase MCM8 [EC:
5.6.2.4
]
Organism
lsv
Lactuca sativa (garden lettuce)
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lsv03032
]
111893105
03400 DNA repair and recombination proteins [BR:
lsv03400
]
111893105
Enzymes [BR:
lsv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
111893105
DNA replication proteins [BR:
lsv03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
111893105
DNA repair and recombination proteins [BR:
lsv03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
111893105
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MCM
MCM_OB
MCM_lid
WHD_MCM8
Mg_chelatase
AAA_5
AAA_3
Sigma54_activat
MCM_N
AAA_16
AAA
DUF4423
Motif
Other DBs
NCBI-GeneID:
111893105
NCBI-ProteinID:
XP_023744947
LinkDB
All DBs
Position
6:43391598..43397612
Genome browser
AA seq
782 aa
AA seq
DB search
MTMMSSGKQISSNGGEISQILAKYFPQIDYKHADGKNKMQLTKTLHEQFFSTADGLDFIS
QVKKEDILFILPLDFQHFRKVCMLEEFYDALERNPKEALLCMSAAVHTTLHSKSNDEELD
EHAKVNIRLHNHPDSMIALKNLKAAYIERLVSVRGTVVKVSTVKPLVIQMSFTCSKCGNT
IARDFPDGKFSPPSSCGTHGCKSRIFNPIRSSAIPIDFQKIRIQELLKSEHHEEGRVPRT
VECELVEDLVDMCIPGDVVTVTGIIRVINNYMDIGGGKSKGRNQGLYYLYLEGVSVKNSK
SQSEETESVAKATDLLDLYSFSQRDLEFVCKFSLEHGSDVFRQILQSICPSIYGHELVKA
GITLALFGGVRKNSMDQNKVPVRGDIHVIIVGDPGLGKSQLLQAAASVSPRGIYVCGNAT
TNAGLTVAVVKDSMTGDYAFEAGAMVLADRGLCCIDEFDKMTAEHQALLEAMEQQCVSVA
KAGLVASLSAQTTVLAAANPVGGHYNRAKTVNENLKINSALLSRFDLVFILLDKPDELHD
KRVSEHIMSLHVANGDHSQTMNKLTSVSSSQSIGETSGSLVSRLRLDSRKDIDFVPLPSP
LLRKYIAYARTYVFPRMSKPAAKILQQFYLKLRDRNTSADGTPITARQLESLVRLAQARA
RVELREEITVEDALDVVEIMKESLFDKYVDEHGVVDFGRSGGMSCQKEAKRLLSALNKQS
EKEQKDCFSEKEMFNLAKKIGISEENFDRLVEIINTAGFVTKKGPKTYQVVSSSYSRSQL
SR
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
atgacaatgatgagctccgggaagcaaatatctagtaatggaggcgaaatctcacaaatt
ttggctaaatatttccctcaaatcgactataaacatgccgatgggaaaaacaagatgcaa
ctcacaaagacgcttcacgaacaatttttctccactgctgacggattagacttcatctct
caggtaaagaaagaagacattcttttcattttgccacttgatttccaacatttccgaaag
gtatgtatgcttgaagaattctacgatgctttagaaagaaaccccaaagaagctcttcta
tgcatgagtgcagcagtacacacgacccttcactccaaatcaaacgatgaagagttggat
gaacatgcaaaggtaaacatccgcctacacaatcaccctgactccatgattgctttaaag
aacctgaaagcagcttacattgaaaggcttgtttctgttcgtggcactgtagtaaaagtt
agcactgtgaagccattagtaatacaaatgagtttcacatgttccaaatgtggaaacacc
attgcacgtgatttcccagatggaaagttctcacctccttcaagctgtggaacacacgga
tgcaaaagcagaatttttaacccgattagatctagtgcaataccaatagacttccagaaa
ataagaattcaagagctgttgaaatctgaacatcatgaagaaggtcgagtgcctagaaca
gtggaatgtgaattggttgaagatcttgtggacatgtgtatccctggagatgttgtaact
gtgactggtattataagggtgattaataattacatggatataggaggaggaaaatcaaaa
gggaggaatcaagggttatattacttgtatctagaaggagtatcagttaaaaactcaaag
tcacaatctgaagaaacagaatcagtggctaaagctacagacttgttggatttatattct
tttagtcaaagggatttggaatttgtttgtaagttttctttagagcatggatcagatgtg
tttcgtcaaatacttcaatcaatttgcccctccatctatggacatgaacttgttaaagct
ggaattacattggcattgtttggaggtgtaaggaagaattcaatggatcagaataaggtt
cctgttagaggagacattcatgtcataattgttggtgaccctggacttgggaaaagtcaa
ctcctgcaagcagcagcttcagtttcaccacgtggcatttatgtttgtgggaatgccaca
acaaatgctggcctcactgttgctgtggtcaaagattcaatgactggtgattatgctttt
gaagctggtgcaatggtacttgcagacaggggattgtgttgtatcgatgaatttgataaa
atgacagcagaacaccaagctttattggaagcaatggagcaacaatgtgtctctgttgca
aaagcaggacttgtagcaagtttatcagctcaaacaactgttttagcagcagcaaatcca
gttggtggacattacaaccgtgcgaaaacagtgaacgagaacttgaaaataaattccgct
ttgctgtcacgatttgatttggtcttcattttgcttgataaacccgatgagttacatgac
aaacgagtttctgaacacatcatgtctttacatgtagcaaatggtgatcattcacaaact
atgaacaaacttacaagtgtttcatcatctcaaagtattggcgaaacgagtggttcactt
gtttcaaggttaaggcttgattcaagaaaagacattgattttgttccgttaccaagtcct
cttctccgtaaatatattgcttacgcaagaacttatgtgtttccaaggatgtcgaaaccg
gcagctaaaattttacaacagttttatttaaaactaagagaccgtaacacgtctgctgat
gggacgccgattacagcgagacagttggaaagtttagtacggttggcacaagctcgcgct
agggttgaattgcgagaagaaataactgttgaagatgctctggatgttgttgaaataatg
aaggaatcattgtttgataagtatgttgatgagcatggagttgttgattttggtaggagt
ggtgggatgagttgtcagaaggaagcaaagcggttgttaagtgcattgaacaagcaatca
gagaaagaacagaaagattgtttctctgaaaaagaaatgttcaatttggctaaaaagatt
gggataagtgaggaaaattttgacaggcttgtagagattataaacactgctgggtttgta
actaaaaaggggccaaaaacatatcaggtggtatcatcgtcctattcacggagtcaattg
tcgaggtga
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