Lactuca sativa (garden lettuce): 111893120
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Entry
111893120 CDS
T05352
Name
(RefSeq) transcription initiation factor TFIID subunit 10
KO
K03134
transcription initiation factor TFIID subunit 10
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
111893120
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lsv03021
]
111893120
03036 Chromosome and associated proteins [BR:
lsv03036
]
111893120
Transcription machinery [BR:
lsv03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
111893120
Coactivators
SAGA/TFTC/STAGA complex
111893120
Chromosome and associated proteins [BR:
lsv03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
111893120
STAGA complex
111893120
TFTC complex
111893120
SAGA complex
111893120
SLIK complex
111893120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF10
SLX9
CBFD_NFYB_HMF
RNA_pol_Rpc82
P22_CoatProtein
Motif
Other DBs
NCBI-GeneID:
111893120
NCBI-ProteinID:
XP_023744964
LinkDB
All DBs
Position
6:43707604..43709627
Genome browser
AA seq
136 aa
AA seq
DB search
MNHNQQSNEAKHDDETALTDFLASLTDYTPTIPDELVEHYLAKSGFQCPDVRLIRLVAVA
TQKFVSEIATEALQQCKARPAPVVRDKKDKQQKDKRLIMNMDDLSKALQEYGINAKHQEY
FADSSSAGMESAQRDE
NT seq
411 nt
NT seq
+upstream
nt +downstream
nt
atgaatcacaaccagcaatcaaatgaagctaaacacgatgacgaaactgccctcacagat
tttcttgcctctttaacagactacaccccaactattcctgatgaactggtggaacattac
ttagccaaaagtgggtttcaatgtccagatgttcgattaataaggctagttgcagttgcc
actcagaagtttgtatcagagattgctactgaagctcttcagcaatgcaaggcaagacca
gcacccgttgtgagggacaaaaaagacaagcaacaaaaggataagcgactgattatgaac
atggatgacctgtcaaaggctcttcaagagtatggtataaatgcgaagcatcaagagtat
tttgcagatagctcttcagctggaatggaatctgctcaaagagatgaatga
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integrated database retrieval system
