Lactuca sativa (garden lettuce): 111893143
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Entry
111893143 CDS
T05352
Name
(RefSeq) protein NPGR1
KO
K21843
tetratricopeptide repeat protein 7
Organism
lsv
Lactuca sativa (garden lettuce)
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lsv04131
]
111893143
Membrane trafficking [BR:
lsv04131
]
Endocytosis
Others
EFR3-PI4KIII alpha complex and associated proteins
111893143
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_16
TPR_19
TPR_CcmH_CycH
TPR_8
ARM_TT21_C
TPR_17
ARM_TT21
ANAPC3
TPR_4
Motif
Other DBs
NCBI-GeneID:
111893143
NCBI-ProteinID:
XP_023744976
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Position
4:265437224..265441220
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AA seq
718 aa
AA seq
DB search
MLCACSGEQFKVEEPISRSPESLATRDFSASGISSRTGTGDWDSKFEDAQVDEAESTLKE
ALSLNYEEARALLGRLEYQRGNFDAALQVFYGIDIRSLSPRMIRAISDRTLQRNSKAKRE
NSVVGVMSLHSVSLLLEAILLKAKSLQEMGRFKEAAKECKMILDIVESALPNGIPDSIAQ
DCKLQEMFHKALELLPKLWIEAGLLNEAIIAYRRALVNSWNLDPQRLSTLQKDLASILLY
GGVEATLPHPKPWDPPYPKSNTEEALILLFILMRKVSCKEIKWDPEIISHLTFALSTCGQ
FECLAVHIEQLLPSAYTRIERWFFLALCYSAAGKIESAINILKKISGSFKEESNSKPHLP
SLLLGAKLCSQDPKYSHEGITFARKVIKLGDEIENRHFESIAHKFLGVCYGNAARVSFSD
SERVVYNQESISSLNKAAASITFNDDPEVLFNLGLENAIQRNLEAAFEKIMMYSDMICGS
SAKGFKLLALIVSGEQRFEDSETIVDIGLDETGRVDQLELLRLKAVLQIAQEQPKQAIET
YKVLLSLIQTHGELQKVNLDFEESERKLEMEAWLDLANIYTKLESFSDAEICVGKAKLKE
FYYPRTWHSTGLLFEAQSLHKEALVAFSISLSIEPDYVPSLISTAETLMRMGGSGSGTHT
VPIARSLLMNTLRLEPTNHEAWFNLGLICKKEGLMHQAADFFQAAHELNLSAPVQSFV
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atgttgtgtgcttgttcgggagagcaatttaaggtagaagagccaatttctcggtcaccg
gaatcattggctacaagggatttctcagctagtggaatttcctctcgaactggcactgga
gattgggattcaaaattcgaagatgctcaagtggatgaagctgaatccacccttaaagaa
gccctttcgctgaactatgaggaagccagagctttgttgggtagacttgagtaccagaga
ggcaattttgatgctgcacttcaagttttctatggaatcgacatcagaagcttgtctcca
aggatgattagggcgattagtgacagaaccctgcaacgaaattccaaggccaaaagggaa
aatagtgtggtaggtgtgatgtcccttcattctgtgagtctgcttcttgaagcgatccta
cttaaagcaaaatcactgcaagagatgggcagatttaaagaagctgcaaaggagtgcaag
atgattttggacatagttgaatcagcattacctaacggaatccctgattccatagctcaa
gattgcaaattacaggaaatgtttcacaaagcattggaattgcttccaaagttatggata
gaagctgggttattaaatgaagccataatcgcatacagaagggcactcgttaactcgtgg
aatttagacccacaaagattatcaaccctacaaaaagacttagcgtctatattactatac
ggaggtgtagaagcaacccttccccaccccaaaccatgggacccaccttaccctaaatcc
aacacagaagaagcactgattttgctttttatactcatgagaaaagtatcatgtaaagaa
ataaaatgggaccctgaaatcataagccatttaactttcgcattatcaacatgtggccaa
ttcgaatgtttagctgttcatatcgaacagcttcttccttctgcatatacaagaatcgaa
agatggttttttcttgctctttgctacagtgctgctggtaaaatcgaatcagccatcaac
attttaaagaaaatttcagggtcttttaaagaagaatcaaattcaaaaccccatctccct
tctcttcttttgggagcaaaattatgttctcaagatcctaaatattcccatgaaggtata
acttttgctagaaaagtgatcaaattgggtgatgaaattgaaaacagacattttgaaagt
atcgctcacaagtttcttggagtttgttatggaaacgctgctagggtttcgttttcggat
tcagaaagagtggtttacaatcaagaatctatcagctccctgaataaagctgctgcttca
attacatttaatgatgatccagaagttttatttaatttgggattagaaaatgcgatacag
agaaacttggaagctgcatttgaaaagattatgatgtattctgacatgatttgtgggagt
tcagcaaagggtttcaagttattggctttgatagtatctggtgaacaaagatttgaagat
tctgagacgattgttgacattggtttggatgaaactggaagagttgaccaattggaattg
cttagactgaaagctgttcttcagattgctcaagaacagcctaaacaagccatagaaact
tacaaggttttgttatcattgattcagacacatggcgaacttcaaaaagtcaacttggat
tttgaggaaagtgagaggaaattggaaatggaagcttggttggatttagcaaatatttac
acaaagctggagtctttttctgatgctgaaatttgtgttgggaaagcaaagttaaaggaa
ttctactaccctcgaacttggcattctacaggtttgttgtttgaagctcaatctttacac
aaagaagcacttgttgcgttctcaatttcactatcaatagaaccggattatgtcccaagt
ttaatttcaacagcagaaaccctaatgagaatgggtgggagtgggagtgggacccacaca
gttccaattgcaagaagcttgttgatgaacacattgaggttagaacctacaaaccatgaa
gcctggtttaaccttggtttgatctgcaagaaggaaggtttgatgcatcaagctgcagac
ttcttccaggctgcacatgagctcaacttatcagctccagttcagagctttgtctaa
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