Lactuca sativa (garden lettuce): 111893436
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Entry
111893436 CDS
T05352
Name
(RefSeq) T-complex protein 1 subunit epsilon
KO
K09497
T-complex protein 1 subunit epsilon
Organism
lsv
Lactuca sativa (garden lettuce)
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
lsv03110
]
111893436
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
lsv03037
]
111893436
04147 Exosome [BR:
lsv04147
]
111893436
Chaperones and folding catalysts [BR:
lsv03110
]
Heat shock proteins
HSP60 / Chaperonin
111893436
Cilium and associated proteins [BR:
lsv03037
]
Primary cilia and associated proteins
BBS-CCT complex
111893436
Exosome [BR:
lsv04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
111893436
Exosomal proteins of colorectal cancer cells
111893436
Exosomal proteins of bladder cancer cells
111893436
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Toxin_27
Motif
Other DBs
NCBI-GeneID:
111893436
NCBI-ProteinID:
XP_023745258
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Position
4:complement(5590721..5593411)
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AA seq
535 aa
AA seq
DB search
MALAFDEYGRPFIILREQESKTRLRGLDAQKANIAAGVAVSRILRTSLGPKGMDKMLQSP
DGDITITNDGATILEQMDVDNQIGKLMVELSRSQDYEIGDGTTGVVVLAGALLEQAEKLL
ERGIHPIRVAEGFEISSRIAVDHLEQIAHKFDFNATNIEPLVQTCMTTLSSKIVNRCKRS
LAEIAVKAVMAVADLERKDVNLDLIKVEGKVGGKLEDTELIYGIIVDKDMSHPQMPKQIE
DAKIAILTCPFEPPKPKTKHKVDIDTVEKFQTLRKQEQKYFDDMVQRCKDVGATLVICQW
GFDDEANHLLMHRNLPAVRWVGGVELELIAIATGGRIVPRFQELTTEKLGKAGLVREKAF
GTTKDRMLYIEHCANSRAVTVFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGGGA
AEISCSIAVEAAADKYPGVEQYAIRAFADALDSVPMALAENSGLSCIETLSAVKAQQIKE
NNPCCGIDCNDTGTNDMREQNVFETLIGKQQQMLLATQVVKMILKIDDVISPSEY
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atggcgttagcgttcgatgaatatggaaggccgttcataatactgagggaacaagaaagt
aagactaggttaaggggtttagatgctcagaaggctaatatcgccgccggcgttgccgtt
tctcgcatcctccggacatctcttggtcctaaaggaatggacaagatgctccagagtccc
gacggcgacatcactatcacaaatgatggcgcaacgatcttggagcagatggatgttgac
aatcaaattggaaaacttatggttgaactatcacgtagtcaagactatgagattggcgat
ggaacaaccggtgtagttgttctggctggtgcacttttagaacaagcagagaagcttctg
gaacgtggaatccatcccatccgagttgcagaaggattcgagatatcatcaaggattgct
gttgatcatttagaacaaatagctcataagtttgatttcaatgccacaaacatagaacct
ttggttcaaacttgcatgaccaccttatcctccaaaattgtgaatcgttgcaagcgaagt
ttggctgagattgctgtaaaggcagtcatggctgttgctgatttagagaggaaagatgtt
aacctagaccttattaaagtggaggggaaagtaggtgggaaactggaagatacagaactc
atctatggaatcattgtcgacaaagatatgagtcacccacaaatgccaaagcaaattgaa
gatgccaaaattgccatcttgacttgcccatttgaacccccaaagcccaagaccaaacat
aaggttgacattgacactgttgagaagtttcaaaccttacgtaagcaagaacaaaaatac
tttgatgacatggttcaaagatgcaaggatgttggggctacattggtaatttgccaatgg
ggatttgatgacgaagcaaatcacttgctaatgcacagaaacttgcctgctgtgagatgg
gttggtggtgtagaacttgagcttatagcaatagcaactggtggtagaattgttcccagg
ttccaagaactaacaactgaaaaactaggaaaggctggtttggttagagaaaaggcgttt
ggtaccacaaaggatcgtatgctttatattgagcattgtgcaaactcaagggctgtaact
gtatttatccgtggtggtaacaaaatgatgatagaggagacaaagcgcagcattcatgat
gcattatgtgttgctagaaatctgatccgtaacaactccattgtatatggtggtggggca
gctgaaatttcatgttcaattgcagtagaagctgctgctgataaatatcctggtgttgaa
cagtatgcgatccgggcttttgcggatgcgttggattctgttcccatggctcttgcggag
aatagtggtttgagttgcattgaaacactatcagcagtgaaagcacaacaaattaaggag
aacaatccttgctgtggtattgattgtaatgacacggggacaaatgatatgcgtgagcag
aatgtgtttgaaaccttgattgggaagcaacagcagatgttgcttgcgacacaagttgtg
aagatgattttgaagatcgatgatgtcatctctccatctgagtattga
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