Lactuca sativa (garden lettuce): 111893914
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Entry
111893914 CDS
T05352
Name
(RefSeq) EH domain-containing protein 1
KO
K12483
EH domain-containing protein 1
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
111893914
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lsv04131
]
111893914
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lsv04147
]
111893914
Membrane trafficking [BR:
lsv04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
111893914
Exosome [BR:
lsv04147
]
Exosomal proteins
Proteins found in most exosomes
111893914
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF5600
EHD_N
Dynamin_N
EH
MMR_HSR1
GTP_EFTU
EF-hand_7
EF-hand_1
TsaE
AAA_28
EF-hand_5
Motif
Other DBs
NCBI-GeneID:
111893914
NCBI-ProteinID:
XP_052621403
LinkDB
All DBs
Position
7:207238966..207242285
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AA seq
541 aa
AA seq
DB search
MDIGLAPINHCSKEHQKIYQDWFVCADSDDDGRITGIDATKFFAMSNLSRQDLKQVWAIA
DSKRQGFLGFQEFVMAMQMISLAQAGHTLTVDLLNKDVDTEELKPPAMEGLDALLAKKKH
HRNPSDFDLNGGASQIEISSSSKHAKNLPLKSVTSIVDGLKKLYIQKLKPLETMHRFNEF
VSPALTNSDFDAKPMVMLLGQYSTGKTTFIKHLLKTGYPGAHIGPEPTTDRFVAVMNGPD
ERSIPGNTVAVQADMPFNGLTGFGGAFLSKFQCSQMPHPLLDHITFIDTPGVLSGEKQRT
QRSYDFTGVTSWFAAKCDLILLLFDPHKLDISDEFKRVISSLKGHDDKIRVVLNKADQVD
TQQLMRVYGALMWSLGKVLNTPEVMRVYIGSFNDKPINVSDDGPMGAELFEKEQEDLLAD
LKDIPKKACDRRINEFVKRARAAKIHAYIMNQLKKEMPSWIGKAKAQQRLVDNLEAVFQK
IQKDHHLPAGDFPNVETFRMSLNGYNIDRFERTKPKMIQAVDDMLAYDIPKLLKSFRNPY
E
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atggatattggtttggctccgatcaatcattgttccaaggaacaccagaaaatctatcaa
gattggtttgtttgcgctgactcagatgacgatggacgtattactggcattgacgccaca
aagttcttcgccatgtccaatttatctcgacaagacctcaagcaggtgtgggcgattgcg
gattctaaaaggcaaggctttcttggtttccaggagttcgttatggcaatgcagatgatt
tctttggcacaagcggggcatacattgactgttgaccttttaaacaaagatgttgatact
gaagaactaaaaccgccagcaatggagggtctggatgccctactagctaagaaaaaacac
catcgtaacccaagtgattttgatctgaatggtggtgcttcacagattgaaatttcatct
tcttcaaaacatgcaaagaaccttcccttaaagtctgttacatcgatcgtggatggcctg
aagaagctatacattcagaagctgaaacctttagaaaccatgcatcgttttaatgaattt
gtttctcctgcattgaccaatagtgattttgatgcgaagcccatggtgatgcttttgggt
caatactcaaccgggaaaacaacattcatcaagcatttgcttaagactgggtatccggga
gctcatattggacctgagcctactacagatagatttgttgctgtcatgaatggacctgac
gagagaagtattccagggaacacagtggctgttcaagcagacatgccgtttaatggtcta
actggttttggaggtgcattcttgtcaaaattccagtgttctcagatgcctcatcctctg
ctggatcacattacgtttatcgacacccctggagttctatcaggagaaaaacaaagaaca
caaagaagctatgactttacaggtgtcacctcttggtttgctgcaaagtgcgatctcatc
ttgcttctctttgatcctcataaactcgatattagtgacgagttcaaacgtgtcatatca
tccctgaaaggacatgatgacaagattcgtgttgtcttaaacaaggctgatcaagttgat
acccaacaacttatgcgggtgtatggagcactaatgtggtcccttggtaaagtcctaaat
acccccgaggttatgcgtgtttacatcggttcctttaacgacaagcctataaatgtgagt
gatgatgggccaatgggggcagaattgtttgagaaagaacaggaagaccttctagctgac
ttgaaagacatacctaagaaggcttgtgatcggagaatcaatgagtttgtgaagcgtgca
agggcagccaagatccatgcatacataatgaaccagcttaagaaggagatgccgagctgg
attgggaaggctaaggcacaacagaggctggttgataatcttgaggctgtttttcagaag
attcaaaaggatcatcatttgcctgcgggagatttcccaaatgtagaaaccttcagaatg
tctttgaatggttacaacatagacagatttgaaagaaccaagcctaaaatgatacaggct
gttgatgacatgctggcttatgatataccaaaacttttgaagtccttcagaaatccgtat
gaatga
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