Lactuca sativa (garden lettuce): 111894201
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Entry
111894201 CDS
T05352
Symbol
LOC111894201
Name
(RefSeq) heat stress transcription factor A-3
KO
K09419
heat shock transcription factor, other eukaryote
Organism
lsv
Lactuca sativa (garden lettuce)
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lsv03000
]
111894201 (LOC111894201)
Transcription factors [BR:
lsv03000
]
Eukaryotic type
Helix-turn-helix
Heat shock factors
111894201 (LOC111894201)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HSF_DNA-bind
TelA
DUF7605
APG6_N
CC_Bre1
SPC25_N
KIF21A_4th
CEP70
NPLP1_C
AFAP_C
DUF5100
Motif
Other DBs
NCBI-GeneID:
111894201
NCBI-ProteinID:
XP_023746050
LinkDB
All DBs
Position
6:complement(39422044..39424386)
Genome browser
AA seq
354 aa
AA seq
DB search
MDHRPYKRSLSSPSYLRPHGSHPLRFENAVVEIEEGDVHHLPQPLDCLIGTPIPPFLSKT
YDLVDDPRLNQIISWSDNGASFIVWDPVEFARVILPRNFKHNNLSSFVRQLNTYGFRKID
TDRWEFACESFLKGKRHLLKNIKRRKSQQTEEWNSNSNSIENEVERLQKEKMEMMQEVIN
LQQQQRGTHEYMESVNEKLQAAENRQKLMISSLAKAFKIPTLLRNHISSQRRVRKFVKHQ
SHDQDLGFDPIPVDDNVRNPDSDSGLKSIDLHELGQPKDLTRESNVVLDVKQEDIWSLDF
ETIAGITHSNDWNDVGIPHSDELAEFGGGDFSDFWDLAASGGEHGETSKNQYGF
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atggatcatcgtccctataaacgctcactttcatctccttcgtatcttcgcccacatggg
tctcatccgttacgattcgaaaatgctgtcgtagagattgaagaaggggatgttcatcat
ctcccccaacctctcgattgtttaatcgggacaccaattccgccttttttgtcaaagacc
tatgatttggtggatgacccgagattaaaccagatcatctcatggagcgataatggtgca
agcttcattgtgtgggacccagtggagttcgcaagggtaatcttgccaagaaatttcaag
cacaacaatctttcaagctttgtgagacaacttaacacatatggttttcgcaagattgat
acagacaggtgggaattcgcgtgtgaaagcttcttaaaaggaaaaaggcatctcttgaag
aacatcaagaggcgcaaatcacaacagactgaagaatggaattcgaattccaattccatt
gaaaacgaggtggaaagattacagaaagagaagatggaaatgatgcaagaggtaatcaac
ctacaacaacagcaacgtgggacacatgaatatatggaatcagtgaatgaaaagcttcaa
gctgctgaaaacagacaaaagcttatgatttcatctttggctaaagctttcaagattcca
acactgttaaggaatcacatttcttctcaaagaagggttcgtaagtttgtgaagcatcaa
tcccatgatcaggatcttggatttgatccaattccggttgatgacaatgttcggaatccc
gattccgattccggtttaaaaagtattgatttacatgaactcggtcaacccaaagatttg
actagagagagcaatgttgttcttgatgttaaacaggaagatatttggagcttggatttt
gaaacgattgctggaattactcattccaatgactggaatgatgttggaattcctcattcc
gatgaattggcggagtttggtggtggagatttttctgatttctgggatttagcagcttct
ggtggtgaacatggtgaaactagcaaaaaccaatacgggttttga
DBGET
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