Lactuca sativa (garden lettuce): 111894227
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Entry
111894227 CDS
T05352
Name
(RefSeq) ATP-dependent DNA helicase Q-like 3 isoform X2
KO
K10901
bloom syndrome protein [EC:
5.6.2.4
]
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv03440
Homologous recombination
lsv03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
111894227
03460 Fanconi anemia pathway
111894227
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lsv03032
]
111894227
03400 DNA repair and recombination proteins [BR:
lsv03400
]
111894227
Enzymes [BR:
lsv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
111894227
DNA replication proteins [BR:
lsv03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
111894227
DNA repair and recombination proteins [BR:
lsv03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
111894227
Bloom's syndrome complex (BTR)
111894227
FA (Fanconi anemia) pathway
111894227
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
TFIIS_M
Motif
Other DBs
NCBI-GeneID:
111894227
NCBI-ProteinID:
XP_023746068
LinkDB
All DBs
Position
8:132094048..132098074
Genome browser
AA seq
709 aa
AA seq
DB search
MQFFIQTVVMKKALLPAKTISKEKQISGKEALTKLLRWHFGHLEYRGKQLEAIEAVLSGR
DCFCLMPTGGGKSICYQIPALAKRGIVLVVSPLIALMENQVMALKEKGVAAEYLSSTQTS
QVRNKIHEELESGNPSMRLLYVTPELIATTGFMLKLTKLHSRGLLNLIAVDEAHCISTWG
HDFRPSYRKLASLRKRLPDVPLLALTATAVPKVQVDVIESLNMENPLVLKSSFNRPNIYY
EVRFKDLLTDPYDDLTDLIKSCGDVCGIVYCLERTMCDDLASHLSKNGISCAAYHAGLNN
KLRTSVLDDWISAKTQVVVATVAFGMGIDRKDVRIVCHYNIPKSMVSFYQESGRAGRDQQ
PSRSILYYGIDDRKKMQFILNNADNKKSQNGSPKKSVDEFNSMVEYCETSGCRRKKILDS
FGEQVSTSVCKKTCDACKDPNLVMKNLEELKTMCSLRNRIGSSQIFMNSSSKSFGEVEFS
EYWSRDDEAIPSEDDDISDDDDDGIDDVEGLTQTPLSSKSRLIEKMELLQRAEEKYYQNK
SPKKLDKNVISDTTRESCKQRLINALKQTQQRLDNFLIDPETSSTFLENECYKKYGKTGK
SFYLSQVASTVRWLSTANTTDLTSRLATTGQSPTSKKSTEVEPSCISNHAMKMNKKDDDA
NVTSGHPSSPSTNTYNDIKLPPIPSFSEFVNKKTNIDSNPSPLKRNRFH
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atgcaattttttattcaaacagtggtaatgaagaaagcgctactgcctgcgaaaactatt
agcaaggagaagcaaatttctgggaaagaagctctaacgaagctcttgagatggcatttt
gggcatctggagtatcgaggaaagcagttggaagccatagaagctgtcttatctggaagg
gattgtttctgtctgatgccaactggtggtgggaagtcgatttgttatcaaatccctgct
ctagcaaaacggggcattgtgcttgttgtttctcctttaatagccttaatggaaaaccaa
gttatggcattgaaggaaaaaggggtagctgctgaatatctctcatcaactcagacttca
caagttaggaataagattcatgaggagcttgaatctggaaatccatcaatgaggttactc
tatgtgacaccagaattgattgcaacaacaggatttatgttgaagctaacaaaacttcat
tccagagggttgttgaatctgatagctgtagatgaggcacattgcatttcaacatggggc
catgattttaggcctagctacagaaagttagcttctttgagaaaacgcctgccagatgta
ccactattagcattgacagctactgctgttcccaaggttcaggtggatgtgatagagtca
ttgaacatggaaaatcctctagtccttaaatcatcatttaatcgaccaaatatatattat
gaagttcgatttaaagaccttctaacagacccttatgatgatctaactgatctaattaaa
tcctgtggagatgtttgtgggattgtgtattgccttgaacgtacaatgtgtgatgacttg
gcttctcatttatcaaaaaatggcatttcttgtgctgcataccatgcagggttgaacaat
aaattacggacttctgttttggatgattggatttctgccaagacacaagtcgtagtggct
acagtggcttttggaatgggaattgatcgaaaggatgttaggattgtttgtcattacaat
attccaaagtcaatggtgtcattctatcaagaatcaggtagagctggtcgtgatcaacag
ccttctagaagcattttgtactatggaatagatgatcgcaagaaaatgcaatttatattg
aataatgcggataacaaaaagtcacagaatgggtcgccaaagaagtcagttgatgaattc
aattcaatggttgagtattgtgaaacatctggttgtcgtaggaaaaagattcttgatagt
ttcggggaacaggtatcgacttcagtgtgtaagaaaacatgtgatgcatgtaaagatcca
aatttagtgatgaagaacttagaggagcttaaaaccatgtgttctcttcgtaatagaatc
ggatcctcacagatatttatgaatagctcctcaaagtcgtttggtgaagtggaattctca
gaatactggtctcgtgatgacgaggcaattccatctgaagatgatgatatctctgatgat
gatgatgatgggattgatgacgttgaaggccttacacagacacccttatcatcaaaatca
agacttattgaaaaaatggaattattacaacgagcagaagagaaatattatcaaaataaa
agtccaaaaaaactcgacaaaaatgtcataagtgacacaacaagggaatcctgcaagcaa
agattgatcaatgcattaaaacaaacacaacaacgcctcgacaactttctgatagaccct
gaaacatcttctacattcttggagaatgaatgctacaaaaaatacgggaaaaccgggaaa
tcattctatttatcacaggtggcaagtactgtgaggtggctttcaacagctaacactaca
gatttgacttctaggcttgccaccaccggtcaaagtccaacttcaaaaaagtcaacggaa
gtagaaccttcctgtatttcaaatcatgcaatgaagatgaacaaaaaagatgatgatgca
aatgttacatcaggacacccttcaagcccttcaacaaacacttacaatgatataaagttg
ccaccaatcccatctttctctgaatttgtcaacaaaaaaaccaacatcgatagcaatcca
tcaccattgaaaagaaacagatttcactag
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