Lactuca sativa (garden lettuce): 111894268
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Entry
111894268 CDS
T05352
Name
(RefSeq) high mobility group B protein 6
KO
K09273
upstream-binding transcription factor
Organism
lsv
Lactuca sativa (garden lettuce)
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lsv03000
]
111894268
03021 Transcription machinery [BR:
lsv03021
]
111894268
Transcription factors [BR:
lsv03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
UBF
111894268
Transcription machinery [BR:
lsv03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
UBF
111894268
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
111894268
NCBI-ProteinID:
XP_023746111
LinkDB
All DBs
Position
3:15646208..15648968
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AA seq
499 aa
AA seq
DB search
MADVATAIPIVIPTKKRTRKPLHPKNSSQNESNIVAGAISQPPLASDHIFAGKENSDSLS
QHKSPKIKKSGKGKNHPKPETASVSFEKELQEMQEKLEKMTLEKQQAEDLLKLKEQELES
HNREQEKVKMELKKLKKLKEFKPTMTLPVLHSLKDKDQVKKKKKKGCTDTKKPATPYIMW
CKDHWTEVKKENPEAEFSEVANILGAKWKTLTPEEKKPYEEKYQIEKAAYSKIVDNEKRE
SEAMKLLEEEQKQKTAMELLEQYMQFKQEAEKEGDIKKNKKEKDPLKPKRPESAYFLFMK
EKRAALIAESKSMVEIAKICGEEWKNMTDKQKAGYEKVAKKKNKQYTQEMEVYKQNKEEE
AENVKKEEDELLKVLKQEALQLLKKKEKTETIIKKTKEEETKKKEEKKNKKNVDPNKPKR
PPSSFFLFSKEARKDLSKEKAGMSNSQLTALISVKWKELGEEDKQKWNGEAAEAMEAYKK
DMEEYNKKWNAVEIPNNDN
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atggccgacgtcgccacagcgattcccatcgttattccgacaaagaagagaaccagaaag
ccactgcaccccaaaaactcttcacagaatgaatctaacattgtcgccggagctatatct
cagccaccattggcgtctgatcacatctttgccggaaaagagaactccgacagcctttct
caacacaaatctccaaagatcaagaaatcaggaaaagggaaaaatcatccgaaacccgaa
acagcatcagtttcatttgagaaagagttgcaggaaatgcaagagaagcttgaaaagatg
acgcttgagaagcaacaagcagaggatcttttgaaactgaaggagcaagaactcgagtca
cataacagagagcaagagaaagttaaaatggagctcaagaagttgaagaagttgaaagaa
ttcaaacccacgatgacactgcccgttttacactcgttgaaagacaaagatcaggtgaag
aagaagaagaagaaaggttgcacagatactaaaaagccagcaactccctacatcatgtgg
tgtaaagatcattggactgaggtcaagaaagaaaatccagaagcagagttcagtgaagtc
gcgaacattttgggggcgaaatggaagacactcacccccgaagagaagaagccgtacgaa
gagaagtatcaaattgagaaagcggcttattcaaaaattgtggataatgagaaaagagaa
agtgaagctatgaagcttttggaagaagaacagaaacagaagacagctatggagttgctt
gaacaatacatgcagttcaaacaagaagcagaaaaagagggagatatcaaaaagaacaag
aaggagaaagatccattgaagccaaagcgaccagagtctgcgtatttcttgtttatgaaa
gagaaaagagcagctctgattgcagaaagcaagagtatggtcgagattgcaaaaatctgt
ggagaagaatggaagaacatgacagacaagcaaaaagcagggtatgaaaaagtggccaag
aagaagaacaagcaatatacacaagaaatggaggtgtacaagcagaataaagaagaggaa
gctgaaaatgttaagaaggaagaagatgagcttttgaaggttctaaagcaggaagcttta
caattgcttaaaaagaaagagaaaacagaaaccatcattaagaaaacaaaggaagaggag
actaagaagaaggaagagaagaagaacaagaagaacgttgatcctaacaagcccaagcgt
cctccatcttctttctttcttttcagcaaagaagcaaggaaggatttgtcgaaagaaaag
gcaggaatgagcaattcccaactgactgctctgatttccgtgaagtggaaggaattggga
gaagaagataagcagaaatggaatggtgaggctgcagaagccatggaagcttacaagaag
gatatggaagagtataacaagaaatggaatgcagtagagatccctaacaacgataactag
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integrated database retrieval system