Lactuca sativa (garden lettuce): 111894585
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Entry
111894585 CDS
T05352
Name
(RefSeq) protein REDUCED CHLOROPLAST COVERAGE 1
KO
K03255
protein TIF31
Organism
lsv
Lactuca sativa (garden lettuce)
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
lsv03012
]
111894585
Translation factors [BR:
lsv03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
111894585
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_10
TPR_12
eIF3_p135
TPR_NPHP3
CLU_N
TPR_2
TPR_9
TPR_MalT
TPR_8
CLU
Motif
Other DBs
NCBI-GeneID:
111894585
NCBI-ProteinID:
XP_042752610
LinkDB
All DBs
Position
7:complement(2384472..2394551)
Genome browser
AA seq
1739 aa
AA seq
DB search
MAPKNGRGKTKGDKKKKEEKVLPVVVDITVNLPDDTHVILKGISTDRVIDIRRLLSVNTV
TCNITNFSLSHEVRGPRLKDTCDVAALKPCTLNLIEEDYDVETATAHVRRLLDIVACTTS
FGPSPVVKEDFSTNVPETKTGKKTSKSQQSNKRSTSLPTLTPPPRQPQSKDVSVDGEGEL
SNSCPKLGSFYEFFSLSHLTPPIQYVRRATRQNEDDILIDDHLFSLEVKLCHGKPIHIEV
YRKGFCSIGKQRILCHNLVDLLRRLSRAFENAYEDLIKAFTERNKFGNLPYGFRANTWLI
PPVAAQVPSGFPPLPTEDENWGGNGGGLGRDGKSDLHPWASEFMYVASMSCKTAEDRQIR
DRKAFLLHSLFVDVAIFKAILAIQHIMENPNINHSDLSSDDTIHTESIGDLRIRVYKDTP
DASCKIDTKIDGSQATGVEKENLVERNLLKGITADENTAAHDIATLGVVNVRYCGYTAVV
KVEEREDDKKQSPLPYIELLDQPDGGACALNINSLRLLLHKKASSILPNLKRSEGEELGT
SRVLVEKLLKESLMKLQEECVESDKFTRWELGACWIQHLQDQKKTEKDKKASTEKVKVEG
LGTALRSLKNKKKDLEGSTKVVDVVNGEVENSVLDFVVESPNSDENENALKKLLSDAAFT
RLKESETGLHCKSLLELIDQSQKYYNEVALPKLVADFGSLELSPVDGRTLTDFMHTRGLR
MRSLGQVVKLSEKLSHVQSLCIHEMIVRAFKHIIQAVIAAVSKPEEMAAGIAAALNLMLG
VPKSKKSCVDSVTKTWLEVFLKKRFDWDLASFNYTELRKIAILRGLCHKVGIELVPRDFD
MNSPQPFKKEDIISLVPVHKQAACSSADGRQLLESSKTALDKGKLEDAVSYGTKALAKLV
AVCGPYHRITAGAYSLLAVVLYHTGDFNQATIYQQKALDINERELGLDHPDTMKSYGDLA
VFYYRLQHTELALKYVKRALYLLHLTCGPSHPNTAATYINVAMMEEGLGNVHVALRYLHK
ALKCNQKLLGPDHIQTAASYHAIAIALSLMEAYPLSVQHEQTTLQILRAKLGPDDLRTQD
AAAWLEYFESKALEQQEAARNGTRKPDASIASKGHLSVSDLLDYINPSHDGQGTDGMGLK
RKTYIQKLKGKSYQTLEVANAEEASPKDLLKQVTDEEAALEHEIQVNQESTSLFVESIPP
IKEETPVPVASELQPPEETGAQNPNPGSNEGGGGEEGWQAVQRPRSAGSYGRRLRQRKAT
TSLNKVYGYQKKGVVHESENGTGRYHFVKKRVMSPSTYVDYHTATPNHNKFGRRIVKGLT
YRVKSSVHVPVEETNSNSSSSEQTTKEASSVPQTQRRSMISIGKSPSYKEVAVAPPGSIS
LLQVTDRDDDIIPDDKEIDNGKHEESVVKEAEEEIFEKVDTKDETEETHLGAIADVVEVD
KVIDKSVIIDMPIPIVPSNASIETETENVKPNQSQEPQNKRLSASATPFNPSPPVVRVAP
MPMNIALPPPGPTPWQMNMTLHPRPPSSPHSPYPTPPPPGTPTPNMMHPHPLPLMYSPPY
TQAPSLSLPIPNTNTTYPMTTGPFHPNHFAWQCNNGLQYVWSNCHPMEFSISPPAVRPIS
DPNMETKQVFDGTFPSPPSLLEANNVDETKQQVSLEKSNDIVGVQNGSNHGQRVENEKTF
NILIRGRRNRKQTLRMPISLLNKPYNSQSFKVIYSRVIRGSEAPKPSTSLSSQPTSTAT
NT seq
5220 nt
NT seq
+upstream
nt +downstream
nt
atggcgcccaagaatggacgtgggaagaccaagggagataagaagaagaaggaagagaag
gttctaccagttgttgtggatataactgtgaatcttcctgatgatacccatgttatattg
aagggaatatcgacagatagagttatagatattcgtcgactattatccgtgaacacagta
acatgcaacatcacaaatttttcgctctctcacgaggtaagaggcccacgattgaaagat
acgtgcgacgttgccgcattgaagccttgcacgctcaatctcattgaggaggactacgac
gttgaaaccgccacagcacatgtcagacgattgttggacatcgttgcctgcacgacgtcg
tttggtccgtcgccggtggtcaaggaggatttcagcactaatgtgccggaaaccaagacc
ggaaagaagacgagcaaatcgcaacaaagcaataagcggtcgacgagtctgccgactttg
actcctccaccgcgacaaccgcagtcgaaagatgtctccgtggatggagagggagagctg
agcaattcgtgtcccaagcttggtagcttttacgaattcttctccctctctcacctgact
cctcctatccagtatgtaaggagagcaacacgacagaatgaagatgacattttaattgat
gatcatcttttctcgcttgaagtgaagttgtgccatggaaagccaatccatatagaagtc
tatcgaaaaggattttgcagcatcgggaagcagcgaattttatgtcacaaccttgttgat
ttgttgcggcgacttagcagggcatttgagaatgcttatgaggacctcattaaagcattc
acggaaaggaacaagtttggaaatctcccgtatgggttcagagccaatacatggctcata
cctcctgttgcagcacaagtgccttcgggtttcccacctcttcctacagaggatgagaat
tggggaggaaatgggggtggtctgggaagggatggaaaaagtgatttgcatccttgggct
agtgaattcatgtatgttgcatctatgtcttgcaaaactgcagaagataggcagattcga
gacaggaaagctttcctattgcatagcttatttgtcgatgttgccattttcaaagctatt
ttagccattcaacatataatggaaaacccaaacataaatcattctgatttaagtagtgat
gacactatacatacggagagcatcggggacttgagaatcagagtctataaggatactcct
gatgctagctgcaaaatagatacaaagattgatggatctcaagcaactggggtggagaaa
gaaaatttggtggagagaaacctactgaaagggatcactgcggatgagaacactgctgct
catgatatagctactcttggtgttgtgaatgtaaggtattgtggttatactgctgtcgtg
aaagttgaggagagagaagatgacaagaaacaatctccattgccatacattgagcttctc
gatcagcctgatggaggagcatgcgcactcaatatcaacagtttgaggttgctgcttcat
aaaaaagcaagtagcattcttcctaatttgaaaagatctgaaggcgaagagctcggtact
tctcgagtccttgtggagaaactattaaaggagagtttaatgaagcttcaggaagagtgt
gttgaatctgacaagtttacaagatgggaacttggagcttgctggatacaacatttacaa
gatcaaaagaaaacagaaaaagacaagaaagcttctactgaaaaggtgaaggttgaaggg
ctcgggacagctcttcgatctttaaaaaacaagaaaaaagatttggaggggagcacaaaa
gttgttgatgttgtgaatggggaagtcgagaattctgtgttagactttgttgtagaatct
cccaattcagatgaaaatgagaatgctttaaaaaaattgttatctgatgctgcttttact
cggcttaaagagtcagaaactgggctccactgcaagtctttgctggagctgattgaccaa
tctcaaaaatattacaacgaagttgctcttccgaaattggttgcagattttggttctttg
gaactatcaccagttgatgggcgaactctaactgattttatgcacacacgaggtctccgc
atgcgttctttaggacaagtggttaagttgtcagaaaaattatcacatgtgcaatctcta
tgtatacatgagatgatagtacgagcttttaagcacattatacaggcagtgattgctgct
gtttctaaaccagaggaaatggctgctggaattgctgctgcactgaatctgatgcttggg
gttcctaaaagtaaaaaatcttgtgttgattctgtaacaaagacatggctagaagttttc
ttgaagaagcgatttgactgggatcttgccagctttaactacacagagcttagaaaaatt
gctatactacgtgggttatgccataaggttggcattgagctggttccaagagattttgat
atgaactctccacagcctttcaaaaaggaggacatcatcagcttagtaccagtgcataag
caagcagcatgctcatctgctgatggacgccaactcctggaatcatcaaaaactgccctc
gacaagggaaagctagaagatgcagttagttatgggacaaaggctcttgcaaagctagtt
gcagtatgtggtccttatcatcgaataactgcaggagcttacagtctccttgctgtggtt
ttgtatcacactggggacttcaaccaggccacaatctaccaacaaaaagctttggacatc
aatgagagagaactgggattggatcatccagataccatgaaaagctatggggatcttgca
gtgttctactatcgacttcaacatacagagttggctctcaagtatgtaaaacgagcattg
tatttgctacatcttacatgtggcccatcacatccaaatactgctgccacgtacatcaat
gtagctatgatggaggaaggtttgggaaatgtccatgtcgccctcagatatcttcataaa
gctctcaagtgcaaccaaaagttacttgggccagaccatatccagactgctgcaagttac
catgcaatcgcaattgctctctctttaatggaagcttatcctctgagtgttcagcatgaa
caaacaaccttgcagatactacgtgcaaaacttgggccagatgatctacgcacacaggat
gctgctgcttggctcgagtattttgaatcaaaggctcttgaacaacaagaagctgcaaga
aatgggactcggaaacccgatgcatccatagctagcaaaggtcatcttagtgtatcggat
ttgcttgactatatcaatccaagtcatgatgggcaagggactgatggtatgggtttaaaa
cgtaaaacctatatccagaagttgaagggaaaaagctaccaaaccttggaggtggcaaat
gctgaggaggcatctccaaaagatcttctgaaacaagttacagatgaagaggcggccctt
gaacatgagattcaagtgaatcaagaatccacctctctatttgttgagtcgataccacca
atcaaggaagaaacaccagttccagttgcttctgagcttcagccaccagaggaaactggt
gcacaaaaccctaaccctggtagtaatgaaggaggaggaggagaagaagggtggcaagcg
gttcaaaggccaagatcagcaggctcatatggacgtcgactaagacagaggaaagcaaca
acgagtctcaacaaggtttacggctatcaaaagaaaggtgttgttcatgagtctgaaaat
ggaactggaaggtatcactttgtaaagaaacgagtgatgtctccttcaacttatgttgac
taccacactgcaactcctaatcataataaatttgggcgtagaattgtcaaaggtttgaca
tacagagttaagtcctcggtccatgtgcctgtggaagaaactaattctaattcttcgtca
tctgaacaaacaacaaaagaagcatcatcagtaccacagacacagagaagatccatgatt
agcattggaaaatctccttcttacaaagaagtagccgtggccccaccaggttccatttct
ctgttgcaggtcacggacagggatgatgacattattcctgatgataaggaaatcgataac
ggtaagcacgaggaatctgttgttaaagaagcggaagaagagatttttgagaaagtggat
acgaaagacgaaacagaagaaactcatttaggagcaattgcagatgtggtggaggttgat
aaggtaatagacaagagtgtaataatcgacatgccaattccaattgttccctccaatgcc
agtatagagacggagacagaaaatgtaaaaccaaatcaaagtcaagaaccccaaaacaag
aggttgtctgcatcagctactccatttaacccatcgccacctgttgtccgtgttgcacca
atgcccatgaacattgctctacctcctcctgggcccaccccatggcaaatgaatatgact
cttcacccaagaccaccttcttcacctcactcaccctaccctacacctccacctccaggc
acccccacccccaatatgatgcacccacacccattgcctcttatgtactctcctccatat
acacaagctccatcgttatcattacccatacccaacactaacactacatatcctatgacc
accggtccctttcatcccaatcatttcgcatggcaatgtaataatgggttacaatatgtt
tggtcaaactgccatccaatggaattctccatctccccaccagcagtaaggccgatttct
gatccaaacatggagaccaaacaggtgtttgatggaacttttccttctcctcctagttta
ttggaggctaacaatgtggatgaaactaagcaacaagtgagtcttgagaaatctaatgac
attgtgggggttcaaaatggctcaaatcatggccaaagggttgagaacgagaagacgttt
aatatattgataagggggagaagaaaccgaaaacagactttgaggatgcccattagtctg
ctcaacaagccatataattctcagtctttcaaagtcatatatagcagagtcatcagagga
agtgaagctccaaagcctagcaccagcctttcttctcaacctacttctactgctacatag
DBGET
integrated database retrieval system
