Lactuca sativa (garden lettuce): 111894635
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Entry
111894635 CDS
T05352
Name
(RefSeq) UV-stimulated scaffold protein A homolog
KO
K23720
UV-stimulated scaffold protein A
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
111894635
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lsv03400
]
111894635
DNA repair and recombination proteins [BR:
lsv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
111894635
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Ortholog
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GFIT
Motif
Pfam:
UVSSA_N
DUF2043
FBXO43_helical
PBDC1
DASH_Dad3
HEAT_GCN1
Motif
Other DBs
NCBI-GeneID:
111894635
NCBI-ProteinID:
XP_023746494
LinkDB
All DBs
Position
7:2333331..2336026
Genome browser
AA seq
635 aa
AA seq
DB search
MEWEVDEGKVAAAVVVGLIEKATNSTEPDLDPRILKSIKSVVRHSDLELRLAVENLMSLM
KRDHSQVRYLALAIIHELFMRSKLFRRLIVENLEQLLSLSVGFRRNQPLPAPPAIASKLR
LKAIEFLERWNTTFGIHYRQLRLGYDYLKNTLRFQFPNLQANAARAQQERRERELRTKEI
LLKKYELLKSNLPSIKEEVKSMVDEINECLDILQSCKEPNLPLSPIDEEEEEYFEEFRNL
ELRQIRDNSLKEADKVQENSENKVVFDALRELYKLLVTKHIVAVQESISVLIRVELSDNR
VRDSMLKEFIDTRNHLKTIKKKCEEAGCGLSVTTDEGGGGGEEDIWEEGTSERFDIPKPN
KQSEEDHDANKSKDDAIKIINSKVVCDADLDPLKSKLMGEAPVMKWGSFLDNWGSVMANQ
RGLEVEGHWGRVDYDAVIPANKVAELNMQATVYEEDDKEIQQCGAPLKKEKGGLCTRRDL
KICPFHGRIVPRDNQGKPLINDNYLSETEPKENLLSVSTEELAKQAVIIKKREFYDNKKE
MKRAKLAKVRGHNDAVLRDAALASTSATCSIGEDVKTREKNNSLAKMLKKKVSVKDRLGT
RLLNRKATARATQMMMMNLGDDRHSKYREAFPNQW
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
atggaatgggaggtagatgaagggaaagtggcggcggcggtggtggtagggctgatagag
aaggctaccaactcaactgaaccggacttggatccgcgaatcctaaaatcaatcaaatcg
gttgtccgtcactctgatttggagctccgtcttgcggtcgaaaacctaatgagcctcatg
aaacgagaccactctcaggtacggtaccttgcactagccataatccatgaactgttcatg
cggtcaaagctatttagaaggcttattgttgagaatttggagcaattgttgagtttaagt
gttgggtttagaagaaaccagccactccctgcacctccagccattgcatccaagctgcgt
ttaaaagcaattgaattcttagagagatggaacactacatttggaatccattacagacag
ctcagattagggtatgattacctgaaaaacacccttagatttcagttccctaatcttcaa
gcaaatgcagccagagctcagcaggagagaagagaaagagagttgcggacaaaagagatt
ctgttaaagaaatacgagctgttgaagtcaaaccttccttcaatcaaggaggaagtaaag
tcaatggttgatgaaatcaacgagtgcttagatatccttcaaagttgtaaagaacccaac
ctcccgctttctcccatcgatgaagaagaagaagaatattttgaggagtttcgtaacctt
gaattgcgacagattcgcgacaattctctaaaagaagcagataaggtgcaggaaaacagc
gaaaacaaagttgttttcgacgcgttgagagaactttacaagcttttagtgaccaaacat
atagttgcagtacaagaatcaatttctgttcttataagggtagaattgtcggataacagg
gttagagactccatgttaaaagaattcatcgatacccgaaatcatctgaaaacaataaaa
aagaaatgtgaagaagcaggatgtggtctttcagtcactacagatgaaggaggaggagga
ggagaagaagatatctgggaagagggcacaagtgaaagatttgatattccaaaacccaat
aagcaaagcgaggaggatcatgatgcaaacaagagtaaagatgatgctataaaaattatt
aatagtaaagtagtttgtgatgctgatttggacccgttaaaaagcaagctcatgggtgaa
gccccggtgatgaaatggggttcctttttggacaactggggttcggttatggctaaccag
agagggttagaggttgaaggacattggggacgggttgactatgatgcagtgattccagct
aataaagttgctgagctaaacatgcaggcaactgtttatgaagaagatgataaagaaatt
caacagtgtggtgcacccctaaaaaaggaaaagggggggctttgtacgcgaagggatttg
aaaatttgcccttttcatgggcgtattgtcccccgagacaaccaagggaaaccattaata
aatgataactacttgtcagagacagaacccaaggagaatcttctgtcagtgtcaacagag
gaattagcgaaacaggctgtgattataaagaaaagggaattttatgataataaaaaggaa
atgaaacgggcgaagcttgcaaaagttcgtggccacaacgacgctgttttgagagatgca
gcgcttgcttccacttcagctacctgttccattggtgaagatgtcaagacaagagagaag
aataatagtcttgcaaagatgctgaaaaagaaagtaagtgtcaaggatagattgggtaca
aggcttctcaataggaaggcaactgcaagagcaacacagatgatgatgatgaatcttgga
gatgatcgtcattcaaagtacagagaagccttccctaatcaatggtag
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