Lactuca sativa (garden lettuce): 111894658
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Entry
111894658 CDS
T05352
Name
(RefSeq) zinc finger CCCH domain-containing protein 64
KO
K24939
CWF19-like protein 1
Organism
lsv
Lactuca sativa (garden lettuce)
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lsv03041
]
111894658
Spliceosome [BR:
lsv03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
111894658
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Gene cluster
GFIT
Motif
Pfam:
CwfJ_C_1
CwfJ_C_2
zf-CCCH_DUS3L
zf_CCCH_4
Torus
zf-CCCH
zf-CCCH_RBM22
zf-CCCH_11
zf-CCCH_4
zf-CCCH_3
Zn_ribbon_16
Motif
Other DBs
NCBI-GeneID:
111894658
NCBI-ProteinID:
XP_052621953
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All DBs
Position
8:133297133..133299849
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AA seq
605 aa
AA seq
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MGQPPPMISNSPPVSFSIPLMAPPRILLTGDPLGHLNQLFKRVSSVNKSTGPFDAVLCVG
QFFPESSEHLEELTEYVEGRKNIPLPTYFIGDYGAGAAKVLSAAAKESGNQGFKMDGLKI
RDNLYWLKGSGKFTLHGLSVAYLSGRRSPSGLIYGTYTQDDIDALRALAEEPGIIDIFLT
NEWPDGILNRASTSNIPPGISDSTGSDAAISELVAEIKPRYHVAGSKGVYYAREPYMNDD
AAHATRFIGLAPVGNASKQKFIHAISPTPASTMSSTEISTKPPNTTLSPYTQAEPEKRSA
ESLSDSQYWRYDVSKRQKLGSGESDKLCFKFISSGSCPRGDTCHFRHDMEAREQSMRGVC
FEFLNKGKCDRGEDCSYKHSLQEKGNSRSKECWFCLSSPNVESHLITSVGENCYCALAKG
PLVQDHVLILPIEHLPNTLTSPPECEIELVRFQKSLKDYFKSHGKEVVFFEWVYIRATHA
NLQAIPVPLSRASAVQDIFNLAAEKLGFKFMVLKSDKSSEGRKLVRREYDGKSSLFYVEL
PGGIILSHVVEENEKFPVQFGREVLAGLLNMADRADWRNCKLSKDEELKMVERFKTSFQE
YDPNN
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atgggccaaccgccgccgatgatctcaaactctcctccggtctccttctctatccctcta
atggcgcctccaaggattctattgactggagatccccttggccacctaaatcagctcttc
aaacgcgtttcgtcggttaataaatcaaccggtccatttgatgccgtattatgcgtcggg
cagttcttcccggaatcgtccgagcatttggaggagctgactgagtacgtagaaggtcgg
aagaatatcccgctaccgacctatttcatcggcgattatggagctggagctgccaaggtc
ctatcagctgctgcgaaggagtctggtaatcaagggtttaagatggatggcttgaagatt
cgggataatttgtactggttgaaaggcagtggcaagttcacactccatggtttatctgtg
gcatacttgtccggtaggcgatcaccaagtggtctaatttatggaacttatactcaagat
gacatcgatgctctgagggcattagctgaagaacctggaatcatagacatattcctcact
aatgaatggcccgatggaatcttgaatagagcttcaacatccaatattcctccaggaata
tcagattccacaggtagtgatgctgcaatatcagagctagttgcagaaatcaaaccccgg
taccatgttgcaggatctaagggtgtatattatgccagagaaccatatatgaatgatgat
gctgcacatgcaacccgttttattggattagccccagtaggaaatgcatctaagcagaaa
tttattcatgcaatttctccaactccagcatctaccatgtcttctactgagatatctact
aaaccaccaaacaccaccttatctccatatactcaagcagaaccagaaaaaagatctgct
gaaagtctttcagattcacagtattggcgatatgatgtctcaaaaagacaaaaacttgga
agtggtgagagtgataagttgtgtttcaaattcatttcttccggttcttgtccacgtggc
gacacgtgtcactttcgccatgatatggaagcaagggaacaatccatgagaggtgtatgt
tttgagtttttgaataaagggaaatgtgatagaggtgaagattgcagctataaacatagt
ttgcaggaaaaaggaaattcaagatcaaaggaatgttggttttgtttatcgagtccaaat
gtggaatcacatttgattaccagtgttggtgagaattgctactgtgctcttgctaaaggg
ccattggttcaagatcatgtacttatattaccaattgaacatctaccaaatactctcact
tcacctccagaatgtgagatagagttggttagatttcagaagagtcttaaagattatttc
aagagccatggaaaagaagttgttttctttgagtgggtttacataagagcaactcatgct
aatctacaggccattccagttcctttatcaagagcatctgctgttcaggatatcttcaat
ttagctgctgaaaagttgggattcaagtttatggtgcttaaaagtgacaagagttcagag
ggaagaaaattggtgcgtagggagtatgatggaaaaagtagtttattttatgtggaactc
cctggaggtataatattatcacatgtggttgaagagaatgagaaatttccagtgcaattt
ggtcgtgaggttttggcagggttgttaaacatggcagatagggctgattggcggaattgt
aagcttagcaaagatgaagaattaaaaatggttgaaagatttaagacgagtttccaagaa
tatgatccgaataactaa
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