Lactuca sativa (garden lettuce): 111894736
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Entry
111894736 CDS
T05352
Name
(RefSeq) probable rhamnogalacturonate lyase B
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
lsv
Lactuca sativa (garden lettuce)
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
111894736
Enzymes [BR:
lsv01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
111894736
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Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
Motif
Other DBs
NCBI-GeneID:
111894736
NCBI-ProteinID:
XP_052624075
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Position
1:1741791..1752906
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AA seq
638 aa
AA seq
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MAMMGVKLHFRKHHVIMDNGIVQLTLTNPGGYVTGIKYNNIDNLLEAHNDESDRGYWDLV
WSPPRSPGTTGTFERIIGTSCEVIVDTDDQVELSFSRTWDSSQEGKHVPLKIDKRFVLLR
GSSGFYSYGIYEHLEGWPGFNLPETRIVFKLRKDKFHYMAMSDDRHRYMPLPDDRSPNRS
KSLAYPEAVLLVDPLEPEFKGEVDDKYQYSCETSDLKVHGWISIDPSVGFWQISPSNEFR
TGGPTKQELTSHVGPINLAMFVSAHYGGNDLVIKFDEGEAWKKVFGPVFMYLNSISTSED
PITLWEDAKKQMLDEVGKWPYRFPASKDFHQAEERGMISGKLMVYDRFISNEQKPAVDAY
IGLAPPGDPGSWQFENKGYQFWRKTNEEGHFLIENILAGTYNIYAWVHGFIGDYINDTTI
TITSGCDIDVGHLVFEPPRHGPTLWEIGVPDRSAAEFYIPDPDIIYTNQFLVNRLNRFRQ
YGLWERYSVLYPDHDLVFTIGESDYNRDWFFAHVTRKKEENTFEKTTWTIKFTLNEVNTN
GIYKLRLALASANVSDLQVRLNDPNKDLPLFSTGIIGGDNAIARHGIHGLYWLFNIDIPG
TNLNTTIENAIYLTQENAGNPFYGVMYDYIRLEGPPSS
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atggcgatgatgggagtgaagttgcatttccgaaagcaccatgtgattatggataacggc
attgttcaactcacactaacgaatcctggtggatatgttactgggataaagtacaacaac
atcgacaatttgcttgaagcccacaacgatgaatctgatagaggttattgggatctcgtt
tggagtccacctagaagtcccggaacgacaggcacttttgaaagaatcattggaacaagt
tgtgaggttatagtcgatacagacgatcaagtagagctctccttttcaaggacatgggat
tcctcccaagagggcaagcacgtcccgttgaagatagacaaaaggtttgtgttgcttcgt
ggttcttcgggtttctactcgtatggaatttacgaacatttagagggatggcctggtttc
aatcttccggaaaccaggatagtgttcaagctcaggaaagacaagtttcactacatggcg
atgtctgatgacagacatcgatatatgcctttgcctgatgaccggtcaccgaatagaagt
aaatcattggcttatccagaggcagttcttcttgtcgatcccttagagcccgagttcaaa
ggagaggtagatgataaatatcagtattcatgtgaaaccagtgatctaaaggttcatgga
tggatatccatagatccatctgtagggttttggcaaatttcgccaagtaatgagttccgt
accggcgggcctaccaagcaggagcttacttcgcacgttggcccgataaatttagcgatg
tttgttagcgctcattatggtggaaatgatttagtaatcaaatttgacgaaggggaagca
tggaagaaagtttttggtccggtttttatgtatcttaactctatctctacgagtgaggac
cctattacactctgggaagatgccaagaagcagatgttggatgaagtaggaaagtggcct
taccgttttccagcttcgaaagatttccatcaagctgaggaacgaggcatgataagtggc
aaattaatggtatatgacagattcattagcaatgaacaaaagcccgcagttgatgcttac
atcgggctagctcctccaggagaccctggatcatggcaattcgaaaacaagggatatcag
ttttggaggaaaacaaacgaggaaggtcattttttgattgaaaacattttggctggcaca
tataatatatatgcgtgggtccacggattcattggtgactatataaacgataccaccatc
accattacatcaggttgtgacattgatgttggccatcttgtttttgagccgccgagacac
ggtccaactttatgggagattggtgtacctgaccgttctgcagctgaattttacattcct
gatcctgacattatatataccaaccagtttctcgtcaaccgtctcaacagatttagacaa
tacggattatgggaaagatactcagttctatacccggatcacgatttggttttcacgatc
ggtgaaagcgattacaacagagactggttttttgcacatgtaaccaggaaaaaagaggaa
aatacatttgaaaaaacgacatggacgatcaaattcacgcttaacgaagtgaacacgaat
ggaatttacaaactaagattggctctagcatctgcaaacgtttctgatttgcaggttcgt
cttaacgatccaaacaaggatttgccattgttttctactggaataattggaggagacaat
gcaattgcaaggcatggaatacatgggttgtattggttgttcaacatagacataccagga
acaaacttgaacactaccatagagaatgcgatttatttgacacaagaaaatgcaggaaac
ccgttttatggagttatgtatgattacattcgtttagaaggaccacctagctcctaa
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