Lactuca sativa (garden lettuce): 111894750
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Entry
111894750 CDS
T05352
Name
(RefSeq) probable rhamnogalacturonate lyase B isoform X1
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
lsv
Lactuca sativa (garden lettuce)
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
111894750
Enzymes [BR:
lsv01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
111894750
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GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
Motif
Other DBs
NCBI-GeneID:
111894750
NCBI-ProteinID:
XP_023746620
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Position
1:1993919..2000347
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AA seq
675 aa
AA seq
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MYPCFLFLYALSFAIFSADTLCVTRARRSSMASTTEMVNLSFQENHVVVNNGIVQITLSN
PEGHLTGIQYKGIDNLLEIMNDEPNRGYWDVVWSPPGSAGTKGTLERIAGTSCEVVIETE
DQVELSFSRTWDSSDEGKLVPLKIDKRYILLRGSSGFYTYAIYQHLEEWPSFNLDNTRIA
FKLRKDKFHYMAMSDDRKRNMPLPDDRLPGRGEELAYPEAVLLVDPVEPNFKGQVDDKYQ
YACELKDLRVHGWICKDPSVGFWQITPSNEFRVGGPIKPELNSHVGPTTLAVFASTHYGG
SDMVIKFSQGESWKKVFGPIFIYLNTVSDEEDPLTLWDDAKNQMSIEVELWPYDFPASAD
FQYGDQRGVVSGRLLVQDRLIYGDDCISAKGAYIGLAPPGEAGSWQRECKKYQFWTEANE
DGYFEIPNIIIGEYNLYAWVPGFIGDYTNSTIINITSGVNIHMGDLVYEPPRDGPTLWEI
GFPDRSAAEFYIPDPDPIYANNFLTHDPNRFRQYGLWDRYSDLYPDEDLVYTVGESNYTN
DFFFAHVLRKTNNDTYEKTTWTIKFNLDNVNESEAYILRLALASAHQSNLQVRINDLNKD
PVFSTGKIGGDNAIARHGIHGVYWLFNIKIPCNYFYTCRENLIYLTQANNQSRFQGVMYD
YIRFEALPTSIVKKN
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atgtatccttgttttctctttctctacgcgttaagcttcgctattttttcagcagatacg
ttatgcgtaacaagagctcgaagatcgtcaatggcaagcacaacagaaatggtgaaccta
tcgttccaagagaatcatgtggtggtgaataacggtattgtccaaatcactctttcaaat
ccggaaggacatcttacgggcatacagtacaaaggaatcgacaatttacttgaaataatg
aatgatgaacctaatcgaggttattgggatgttgtatggagtcctccgggaagtgctgga
accaaaggtactttggaaaggattgcaggaacaagttgtgaagttgtaatagaaactgaa
gatcaggtggaactctcattttcgagaacatgggattcttctgatgagggaaagttagtc
cctctcaaaatcgacaaaaggtatattttgcttcgtggatcatcaggcttttatacctac
gcaatttaccaacatttagaagaatggccaagtttcaatcttgataataccagaattgct
tttaagttgaggaaagacaagtttcattatatggccatgtctgacgaccggaagaggaat
atgcctttgccagatgatcggttgcctggaagaggtgaagaattagcctatccagaggca
gttctccttgttgatcctgtggagcctaacttcaaaggacaggtagacgataagtatcaa
tatgcttgtgaattaaaagatcttcgagtccatggatggatttgtaaggatcctagtgtg
ggattttggcaaattacaccaagtaatgagtttagagttggtggtcctattaaacctgag
ttgaattctcatgttggacccacgactcttgcagtatttgcaagtactcattatggtgga
agcgatatggtgatcaaattttctcaaggggagtcgtggaagaaagtctttggccccatt
tttatatatctcaacactgtttccgatgaagaagaccctcttacgctttgggatgatgcc
aaaaaccagatgtctattgaagtggagctctggccatatgactttcccgcttctgctgac
ttccaatatggtgatcaacggggtgtcgttagtggtagattacttgtccaagataggctt
atttatggcgatgattgcatatcagcaaagggtgcttacatcgggttagcaccaccaggg
gaagcgggatcatggcaaagagaatgcaagaaatatcaattttggactgaagcaaatgag
gatggctattttgaaataccaaacataatcattggtgaatataatctatacgcttgggtc
cccggatttattggtgattatacaaattcaaccatcatcaatattacttcaggtgttaat
attcacatgggtgatcttgtatacgagcccccaagagatggtccaactttatgggagata
ggatttccagatcgctcagcagctgagttttacatccctgatcctgacccgatatatgcc
aacaattttcttactcatgatcctaacaggtttagacaatatggattatgggacagatat
tcagatttgtatcccgatgaagatttagtatacacggttggagagagcaattataccaat
gatttcttctttgctcatgttctcaggaaaacaaacaatgacacttatgagaagacaaca
tggacgatcaagtttaaccttgataatgtcaatgaaagtgaagcatatatacttagattg
gcacttgcttccgcacatcaatctaatttgcaggtacgtattaatgatttgaacaaagat
cctgtgttttcaaccgggaaaattggtggagacaatgcaattgcaaggcatggaatacat
ggtgtatattggttattcaacattaaaataccatgcaactatttttacacttgtagagaa
aatttaatctacttaacgcaagcaaacaatcaaagtcgttttcaaggagtaatgtacgac
tacatccgttttgaagcgcttccaacttccatagttaaaaaaaattga
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