Lactuca sativa (garden lettuce): 111895075
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Entry
111895075 CDS
T05352
Name
(RefSeq) THO complex subunit 7B
KO
K13176
THO complex subunit 7
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv03013
Nucleocytoplasmic transport
lsv03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111895075
09122 Translation
03013 Nucleocytoplasmic transport
111895075
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lsv03019
]
111895075
03041 Spliceosome [BR:
lsv03041
]
111895075
Messenger RNA biogenesis [BR:
lsv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
111895075
Spliceosome [BR:
lsv03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
111895075
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
THOC7
DUF4844
Ltn1_1st
ATG14
DUF3450
DUF2570
Motif
Other DBs
NCBI-GeneID:
111895075
NCBI-ProteinID:
XP_023746960
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All DBs
Position
1:complement(133578174..133579486)
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AA seq
248 aa
AA seq
DB search
MLKSRKVSGRGEATGGAAHYAFGALDDDIIIKHRLLTRTTTTRGEPPLKKLQKKFTSFAL
ETEKDSENYAECERLAKAFLQELKTFELPLVKTKAVIDANVREKENFNELNDKINRKIVE
AHDDIEDLKKQLEESKVERKHKEECETIRKLIAAQPPRSQTQKLINDLEKEIASLEAENT
ASSRTLELRKKQFALLLHVVDELQNTIEEEQKSMMEEMRMAIYENKNIVEDATVSVTGGS
SETPMAID
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
atgttgaaatccaggaaagttagtggtagaggagaagcaaccggaggagctgcacattac
gcatttggagccctagacgatgatataatcatcaaacacaggcttctcaccagaacaaca
accacaagaggtgaacctccattgaaaaagcttcagaaaaaattcacctcttttgctctg
gaaaccgagaaagactcagagaattatgccgagtgtgagaggcttgcgaaggcattctta
caggagctcaagactttcgagctcccattggtgaaaacaaaagcggttattgatgcaaat
gttagagagaaggagaatttcaatgagttgaatgataagatcaatcggaagatagtggaa
gcacatgacgatattgaggatttgaagaagcaacttgaggagagtaaggttgagcggaag
cataaggaggagtgtgagacaattaggaagctgattgctgcacaacctccaagatctcag
acccagaagctgattaatgatctggagaaagagattgcatctttggaagctgaaaatact
gcaagttcaaggacattagagcttcggaagaaacaatttgctcttctgttacatgtggtg
gatgagttgcagaatacaattgaagaagaacaaaagagtatgatggaggaaatgagaatg
gcaatttatgaaaacaagaacattgttgaggatgctactgtgtctgttactggtggaagt
tcagaaactcctatggccattgattaa
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integrated database retrieval system