Lactuca sativa (garden lettuce): 111895355
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Entry
111895355 CDS
T05352
Name
(RefSeq) truncated transcription factor CAULIFLOWER D isoform X2
KO
K09264
MADS-box transcription factor, plant
Organism
lsv
Lactuca sativa (garden lettuce)
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lsv03000
]
111895355
Transcription factors [BR:
lsv03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
MADS-box regulators of differentiation, Homeotic genes
111895355
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
SRF-TF
K-box
CCDC89
DUF1192
MED33_TPR-like_2nd
Ig_CYK3_C
Motif
Other DBs
NCBI-GeneID:
111895355
NCBI-ProteinID:
XP_023747202
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All DBs
Position
4:138899479..138905711
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AA seq
213 aa
AA seq
DB search
MGRGKVELKRIENPTNRQVTFSKRRDGLLKKAIELSILCDAEVALLVFSPSGKAYHFSSH
DMDMTIRRYRNEKGLHKMNNHGVRTIEVWKNEMDEMKKTIEILETKHKHLAGEDLSSLGI
KELKQLERQLRIGVDRVRSKKWRLLSEHISLLKRNHKTLQEEHTILQKKLHELLNEADEY
SGLDSSDHAIQRFIPDGQSHSPLNMNQLGFSNN
NT seq
642 nt
NT seq
+upstream
nt +downstream
nt
atgggaagggggaaagtcgagctaaagagaatagaaaatccaacaaataggcaagtcacc
ttctccaagagaagagatggtttgctcaaaaaagccattgaactctccattctctgtgat
gctgaggttgctcttcttgtcttctctccttctggcaaagcttatcacttctccagccat
gacatggatatgactatcaggaggtacagaaacgaaaagggtctgcataaaatgaacaac
catggagtaagaaccatcgaggtatggaagaacgaaatggatgagatgaagaagacaatc
gagatactcgaaacaaaacacaagcatttggctggagaagatctttcatcactagggata
aaagaactcaaacaacttgaacgccaactgaggatcggagttgatcgcgtccgatctaaa
aagtggcgccttttatcggagcacataagtttattgaagagaaatcataaaaccttgcaa
gaagaacatacgattcttcagaaaaaacttcatgagctgcttaacgaagctgatgaatac
tcaggcttggattcatcagatcatgcaattcaaaggtttattccagatgggcaatctcat
tcaccactcaacatgaaccagctcggtttttccaacaattaa
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