Lactuca sativa (garden lettuce): 111895391
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Entry
111895391 CDS
T05352
Name
(RefSeq) recQ-mediated genome instability protein 1 isoform X1
KO
K10990
RecQ-mediated genome instability protein 1
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
111895391
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lsv03400
]
111895391
DNA repair and recombination proteins [BR:
lsv03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
111895391
FA (Fanconi anemia) pathway
111895391
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Ortholog
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GFIT
Motif
Pfam:
RMI1_C
RMI1_N_C
RMI1_N_N
Motif
Other DBs
NCBI-GeneID:
111895391
NCBI-ProteinID:
XP_023747239
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Position
4:complement(140683814..140687728)
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AA seq
669 aa
AA seq
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MSSRRRLRIICSSDEEDDDEEIQEVQPPPQQHDDIECETLNLQDVTLSSINSNPTNPSTS
IQVEISDEDFIDAAEDLSPSPQSPPPPPPPPSNQTGYSSEYSRTSSAGTSEASGCPIGKI
LEDLGLRLRREWLDACLRGLQTNVPGFSSFDATKKAKLCFEKFLHSDMNICGAGFLPDNV
HQMHLVDLPGPYVLQVDEIVNISQPLRERYKKTPSGLKRCLKLSMTDGVQRIFGMEYQPI
KDLDALSPAGLKVAISNVNVRHGLLMLVPEVFQVLGGLVEELDAARQRLVNEVNKPPRGK
RTRTGVAASLATRATRAAWSTDNVHASANTVSQSATPIHVNNQGTTTPSVNGRVGSNSSV
PVHREHVSASSNNHVFQNATPNPIQVDDQGTTTTRPSVNGNMSSSSSVDREFVFRASNNH
TSQNDATTPIQVDKQEQSNISVSENATLIHVDDEGTTTPLVNGRVQVESSSVDFSTRVTE
ETISTVDFSNERETHSTAYACGINTENPFTYMATLSRKWDESKHNASHVQGKIKCFLTGV
KGFQFKESSTYKLQVYIDDGSLISEILIDHNVVQRKIGYSPEEVNAALSSRDSTRVHDMK
NKMKQFQVFLVNFEGTMVVRINEACGLPVAIEMQQGCCLSEAWSLLTRLKSTSNTHQNHL
HFHPIHLSP
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atgtcctccaggaggcgtctgaggataatttgttcatctgacgaagaagacgacgacgaa
gaaatacaagaagtacaacctcctcctcaacaacacgatgatatcgaatgcgaaaccctc
aatcttcaagatgtaaccctaagttccatcaactctaaccctaccaatccctctacttcc
atccaagtcgaaatatccgacgaggacttcatcgatgcagccgaggatctctccccttct
cctcagtctccacctccgcccccgcccccaccctcaaaccagacgggttattcttcggaa
tattccagaactagcagtgctggtacgagtgaagcttctggttgtccaatcggtaaaatt
ctagaagatttagggttgagactacggcgtgaatggttggatgcttgtcttcgtggtctc
cagacaaacgtccctggattttccagctttgatgcaacaaaaaaggctaagctctgcttc
gagaagtttttgcattctgatatgaacatttgcggggcaggctttcttccagataacgtg
catcaaatgcaccttgttgatcttcctggaccttatgtgttacaggttgatgagatagta
aatatcagtcaacctcttcgagagcgatacaagaagacaccttctggcttaaagaggtgc
cttaagttgtctatgactgatggtgttcaacgaatctttggcatggaataccagcctatt
aaagatctagatgccctttcacctgctggattgaaggttgctatttctaatgtaaatgta
aggcatgggctactaatgctggttccagaagtgtttcaagttttaggaggactggttgag
gagctggatgcagcaaggcaaagacttgttaatgaagtcaataagcctccaagaggcaaa
agaacaagaacaggagttgcagcatctttagcaactagagctactcgtgctgcatggtca
actgacaatgttcatgcttcagctaacactgtatcccaaagtgcaactccaatacatgta
aataaccaaggtactactactccttctgttaatggaagagtgggatcaaattcttcagtt
cctgttcatagggaacatgtttcagcatcctcaaataatcatgtctttcaaaatgcaact
ccaaatccaatacaggtagatgatcaaggtactactactactagaccttctgttaatgga
aatatgtcatcaagttcttcagttgatagggaatttgtttttagagcctcaaataatcat
acctctcaaaatgatgcaacaactccaatacaggtagacaaacaagaacaatcaaacatc
agtgtctctgaaaatgcaactctaatacatgtggatgatgaaggtactactacacctctt
gttaatggaagagtccaagtagaatcatcttctgttgacttttccactagggttacagaa
gagaccatttccactgttgacttttcaaatgagagagaaactcattctactgcatatgcc
tgtggtataaacactgaaaaccctttcacatacatggccactttatcacgtaaatgggat
gaatcaaaacataacgcctctcatgtccagggtaaaatcaagtgttttttaactggagtg
aaagggttccagtttaaagaaagtagcacctacaaacttcaagtatacatagatgacgga
agcctcatatccgagatccttattgaccacaacgttgtacaaagaaagataggttattcc
cctgaagaggtgaatgccgctttgtcatctcgagactctacaagggttcatgacatgaag
aacaaaatgaaacagtttcaagtttttttagtcaacttcgaggggacaatggttgtaagg
ataaatgaagcatgtggtcttccggttgctatagaaatgcaacagggttgttgtttatct
gaagcatggtcgcttcttacaagactaaaatcaactagtaatactcatcaaaatcatcta
cattttcacccaattcatctttccccataa
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