Lactuca sativa (garden lettuce): 111895411
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Entry
111895411 CDS
T05352
Name
(RefSeq) uncharacterized protein LOC111895411
KO
K13091
RNA-binding protein 23/39
Organism
lsv
Lactuca sativa (garden lettuce)
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lsv03041
]
111895411
Spliceosome [BR:
lsv03041
]
Common components
Common spliceosomal components
General mRNP proteins
111895411
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_7
RRM_8
Motif
Other DBs
NCBI-GeneID:
111895411
NCBI-ProteinID:
XP_023747263
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All DBs
Position
8:complement(203385576..203393964)
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AA seq
659 aa
AA seq
DB search
MLLKSQRFFEECRPSRKHFHSFQQPDGFNPQSPLLHGGLQYVAQFWELLADFTMDFDEYD
YLEKMVENPEPPKSDQRANGGEESGKNEDKDRSRSSRHRSEKSSDDRRSKRAKSGEDSRE
REKERGSSHHRSSPKDGDRSDRDKQRGTRETRDRDRDKDRSREDRNGKGRDKDRERERER
DRGGDRDRERDRVRVKREHGREPEKEREERDQEKEKEHERPHRSGSRSERHGSERDREKS
RDREVKDKEREKEKEKEREIREPDRDRESRRYKDKKEGAVEPEVDPERDQRTVFAYQISL
KADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYIEFYDAMSVPMAIALSGQPLLGQP
VMVKPSEAEKNLVQSTATAAGVAGGAAYAGGARKLYVGNLHYNMKEDQLRQVFESFGVVE
LVQLPTDETGNCKGFGFIQFARLEDARAAQSLNGQLEIAGRMMKVSAITDQSGMQEMGVN
PGDFDDDEGGGLSLNARSRALLMQKLDRSGNTTSALGIPANNSTGLAPAGVPFSGLASMP
GAVPLQLPLPPVPVPPIESIGIPSECLLLKNMFDPELEDEPDFDLDIKDDVQSECAKYGK
LRHIYVEKESAGFVYLRFENSQSAVAAQQALHGRWFAGKMITATFMVPQNYEGKFPDSI
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atgctgttaaagtcgcagcgattttttgaggagtgtcggccttcgagaaaacacttccac
tctttccaacaaccagacggtttcaatccgcagtcacctcttctccacggcggtcttcaa
tacgttgctcagttttgggaactattagctgactttacaatggattttgatgagtatgat
tacttggaaaaaatggtggaaaatcccgaaccaccaaagtcggatcaaagagctaatggt
ggtgaagaaagtggtaaaaatgaagataaagatcgaagccgaagctctaggcatagaagt
gagaaaagcagtgatgatcgtaggtcaaaacgtgcaaaatcaggtgaagattcccgtgaa
cgtgagaaagaaagaggctcttctcaccatcgttcatctccaaaagatggggataggagt
gatagagacaaacaaaggggtacccgtgaaacacgagacagagatagggataaagatagg
agcagggaggacagaaatggaaagggtagagataaagatagagaaagagaaagagaaaga
gacagaggtggtgacagggatagggagagggacagagtgagggtaaaaagggagcatgga
cgtgagcctgagaaagaaagggaagagagagatcaagagaaagagaaagaacatgaaaga
ccacatcgaagtggaagccgatcagaaagacatgggagtgaaagggacagggaaaagagc
cgtgatagagaggtcaaagataaagaaagagaaaaagaaaaagaaaaagaaagggaaatt
agagaacctgatcgtgatcgtgaaagcaggcgatataaagacaaaaaggaaggagcagtc
gagccggaggttgatcctgaaagagatcagcgcactgtctttgcatatcagatatctctc
aaggctgatgaaagagatgtttatgagttcttctcaagggctggcaaggttcgagatgta
cgtcttattatggaccgaaactcaaggcgctcaaaaggggttgggtacattgagttttat
gatgcaatgtctgtccctatggcaatagcactatctggtcaacctcttcttggtcaaccc
gtcatggtcaaaccatcagaagctgaaaagaatcttgtgcagtccactgcaacagctgct
ggggttgcaggcggtgcagcatacgcagggggggctagaaagttatatgttggcaatctt
cattacaacatgaaagaagatcaacttcgccaggtatttgaatcatttggtgttgtagag
ctggtgcaattgcctactgatgagactggaaattgtaaaggttttggttttattcagttt
gcacgtcttgaagatgctagagctgcacagagtttaaatggtcaattggagattgcaggt
cgaatgatgaaggtgtctgccattactgatcaatctggaatgcaagaaatgggtgtaaat
cctggtgattttgatgatgacgaaggaggtggcctgtctttgaatgcacgttctcgagca
cttctcatgcagaagttggatcgtagtggaaacacaacaagtgcacttggcatcccggcc
aataatagcacaggcctagcgccagctggcgttcctttttctgggcttgcatcgatgcct
ggtgctgtgccactccaactcccactcccacctgttcctgttccacccatagagagcatt
ggtatccccagtgaatgtctgttgctgaaaaacatgtttgatcctgagttagaggatgag
ccagattttgatcttgatatcaaggatgacgttcaatctgaatgcgcaaaatacggaaag
ctaagacatatttatgtcgagaaggagagtgctggatttgtgtatttacgttttgagaat
agtcaatctgctgtagctgctcagcaagctcttcatggaagatggtttgctggaaagatg
atcactgctacctttatggtgccacaaaactatgagggcaaatttccggacagcatctag
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