Lactuca sativa (garden lettuce): 111895446
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Entry
111895446 CDS
T05352
Name
(RefSeq) uncharacterized protein LOC111895446 isoform X1
KO
K10895
fanconi anemia group I protein
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
111895446
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lsv03400
]
111895446
DNA repair and recombination proteins [BR:
lsv03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FANCD2-I complex
111895446
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FANCI_S4
FANCI_S2
FANCI_HD2
FANCI_HD1
FANCI_S1
Motif
Other DBs
NCBI-GeneID:
111895446
NCBI-ProteinID:
XP_023747294
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All DBs
Position
6:complement(168671935..168677433)
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AA seq
1319 aa
AA seq
DB search
MTTATANHRNNSPPLTPDDIIRLAQYHTTAPLHPYLLSPTSHETLVSHLHTLPPSAVSEY
TSSLLSLLSPSPSVSTLLTSLLNSYLILFTSNKIPHDRRSLKTLELFSPHLENIPINELQ
TISDTIVSSISQINRDPDEAQLLDLLPKCLHIIFNSNEIDKPQDSVDAVFDRILDCNWSR
ILLVKLVSIIHEFKFVGKGRGKLYAQKVFDNMHCVELQDLPSLVYQLLVLASKGFNKREI
IEGIVMFFGTKMHSKKASSNIIREVEGTVLLHVNFAVKQDPSLGQEIMGLVRSNLQAVDH
FVVGLLLSIARIRRYRENSMGTLKTALITAYKDYKFSRHCKWLPDDLKEEYLQNALLTEK
AVLRIVNESNHGREHIVPSIVHLGFLFLESGEEMSHKELGNTGLIGSQELGIQMLKSLFE
VHDMARNEIIEQCKFRILSLKPDQSLAIIRLLGNLVQNYPYPILEYVSHLKELLDYFGFM
HSKVASHLINILVPLIKFSHNLQDYIILVVRKAMFRQEDQIRLAAAGAIIDLILADKKSK
QNMPSSYQESSSQASSSQQPQITRGISNDLFKELSSLLQRCLYQQGKVKEVVYQGLVKLV
LVDPLTAGEVFDFLWPHFLQFYKEDGELNIIQCIKTENNKACIVEPLDDLLSCVSWVLSL
QPQEKSESWASFGFSLTQENEQAGGTVSGESFSNALSRIRKLLRNGNLEGQLGLDTPQEG
ETYKYSAKIMSGVIEVILNTLATELEKASNDTKIDLEKELIDLVDLHESLCTQNNGARKE
TPRSTAPDLTYKNESDNTKWCKETTTFMSTSSIHHLFQLYKSSNQHSKLFSFVLNATFCK
IKSCSNVAKDDPLKGLMYGDIKILGPPLLKVITLLIHPDQKKKEAKGKKDEEDKKGLVLL
ALICLKELLTICSQSPEEMREIEDMLSDSLVEDEPLNIQREEVFITKIVKPLFSKLLQAK
LFHEIEVLCDIAKIIGCKTIGDWAIRICETSNIANTKIAKNVVNLALSCTQAPNDLAVAQ
DMALELIKTTGSETYRIINNSTETVISSVILQFLESVLADMDRISMKMKTCFTSAYKGIQ
MDDNGIHKSHLTLEETLYQRAEAVMELLSSFVVMNLKDLQGEHVVRLAAKFYKNLARVSK
FLIAPKGCKQILPSLKFQKLVEVTCKQLTGPLYIFMETMQQKQQASSRASKGILNKIKRE
NRCIPDLIFQIEDYEKYLILLGKACKMNLLRHAKRSTARDFRITGPQEHEHGNDQEHDEA
AAQNDLVQDSENGEEDDALLPDTGTPFAAEDSEEDDSLIPRKKSRIVEDSDDEANIESA
NT seq
3960 nt
NT seq
+upstream
nt +downstream
nt
atgacgaccgccaccgccaaccaccgtaacaactcaccgcctctcaccccggatgacata
atccgcttagctcagtaccacactactgcaccgcttcatccttacctcctctccccaact
tctcacgaaaccctcgtctcccacctccacactctccctccctccgccgtctctgaatac
acatcgtctctcctctctctcctctcgccatctccttctgtatctaccctactcacatct
cttctcaattcctacttaatcctcttcacttccaacaaaattccccatgatcggcggtct
cttaaaaccctggaactcttctctccccatctagagaacatcccgatcaacgaactacaa
acaatctctgatacaatcgtttcgagtatctcacaaatcaacagagatccagatgaagcg
cagcttctcgacttgcttccgaagtgtcttcacatcatatttaactctaatgagatcgat
aaaccccaggattcagttgatgcggtatttgatcgtatcctagattgtaattggtcaagg
attttgttagtgaaactggtttctatcattcacgagttcaagtttgttggtaagggaaga
ggtaagctgtatgcacagaaggtgtttgacaatatgcattgtgttgagctgcaggatctt
ccttcattagtttaccagttacttgttttggcttcaaaagggttcaacaagagggaaata
attgaaggtattgttatgttctttggaaccaaaatgcattctaaaaaggcgagttctaat
atcatcagggaagttgaagggactgtactgttgcatgtcaatttcgctgtaaagcaagat
ccttcactggggcaggaaattatggggcttgtgaggtcaaatcttcaggcagttgatcat
tttgttgttgggctattgttgtcaatagcaagaattagaaggtacagggagaactccatg
ggaacactgaaaacagctctaatcactgcttataaggattacaaattttcaagacattgt
aaatggctacctgatgacttaaaggaagagtatctacaaaatgccctattgacagagaaa
gccgtgctaagaattgttaatgagagtaatcatggaagagaacatattgttcctagcata
gtccacttgggctttttgtttctggaatcaggggaggaaatgagccataaagaacttgga
aacacaggtcttataggttctcaagagcttggtattcaaatgctaaaaagtttatttgag
gttcatgatatggcaagaaatgagattattgagcaatgtaaattccgaatcctttctctt
aagcctgaccaaagtttagcaatcataaggttacttggtaacctagttcagaactaccca
taccccatattagaatatgtgtcacatctgaaggaattgttggattattttggttttatg
cacagcaaagttgcttcccatttgattaacattctagtgccactcatcaagttcagtcat
aaccttcaggactacataatcttggtggtgcgcaaggctatgttcagacaagaagatcaa
atccgcttagctgcagctggagccattatcgacttaattcttgcagacaaaaaatcaaaa
caaaatatgccatcttcttatcaagaatcctctagccaagctagcagcagtcaacaacct
caaataacccgtggaattagcaatgatcttttcaaagagctcagtagtttattacaacgt
tgcctctatcaacaggggaaagtgaaagaggttgtataccagggacttgtaaagcttgtg
ctggttgatccattaacagcaggggaagtttttgattttctatggcctcactttctacag
ttttacaaagaagatggtgaacttaatataatccaatgcattaagactgagaataacaaa
gcttgtatagttgaaccacttgatgatcttctatcttgtgtctcatgggttctttcactt
cagccacaagaaaaatctgaatcatgggcttctttcgggttctcacttacacaggaaaac
gagcaggcaggaggaacagtttctggtgagtcgttttccaatgctttgtcaagaatccgg
aagcttctaagaaatggaaatttggaaggacagttaggtttagatacaccacaagaagga
gagacatacaaatatagtgctaagattatgtcaggtgttattgaggtgatattgaataca
cttgctactgaattggaaaaggcaagtaatgatacaaagattgatttagagaaagagttg
attgatcttgttgatctacatgagtccttatgtacacaaaacaatggtgctagaaaagaa
acacctcggtctactgctcctgatctaacatataaaaatgagtcagataacacaaagtgg
tgtaaagaaacaactactttcatgtcaacatcaagcattcatcacttgtttcaactctac
aagtcatcaaaccaacattctaaactgttctcttttgtgttaaatgccactttttgcaag
atcaaatcttgttccaatgtggcaaaagatgatccattgaagggtttgatgtatggggat
ataaagatcctaggtccaccattgttgaaagtgatcacgttgctcattcacccagatcaa
aagaaaaaggaagctaaagggaaaaaagatgaagaagataaaaagggtctcgttctcttg
gctctaatttgcttgaaagaactgctaacaatctgttctcaaagcccagaggaaatgaga
gaaattgaagacatgttgtcagattctttagttgaggatgaaccactgaacattcaaagg
gaagaagtcttcattacaaaaattgttaaacctctgttctctaagcttcttcaagcaaag
ttattccatgaaattgaggtgctgtgtgatattgcgaagattattgggtgtaaaactatt
ggtgattgggcaataagaatttgtgaaacaagtaatatagcaaacacaaagattgcaaaa
aatgtagtgaatctagcactatcgtgtactcaagctccaaatgatttggctgttgctcaa
gatatggcactggagttgataaaaacaacaggatcagaaacatacagaatcataaacaat
tcaacagaaactgttatatcatcagtgatcctacagtttcttgaatcagttcttgctgac
atggatcgaatcagtatgaagatgaaaacatgtttcactagtgcttataaagggatacag
atggatgataatgggatacacaagtcacatttgacattagaagagactctgtaccagagg
gctgaagctgtcatggaactgttatcttcttttgtggtgatgaacctcaaagatcttcaa
ggtgaacatgtagtgagattggctgctaaattctacaagaacttagctagggtttcaaag
tttcttatcgcacctaaaggttgcaagcagattttaccaagtctcaagtttcaaaaactt
gtggaagtgacttgtaagcagttaacaggtcctttgtacattttcatggaaacaatgcag
cagaaacaacaagccagtagcagagcaagtaaaggaattttaaacaagattaaaagggag
aacagatgcatcccagatttgatatttcagatagaagattatgagaagtatctgattcta
cttggcaaagcttgcaagatgaacttgttgaggcacgcaaaacgtagcactgctagagat
tttagaataaccggcccacaagaacatgaacatgggaatgatcaggaacatgatgaagct
gctgctcaaaatgatttggtacaagactctgaaaatggtgaagaagatgatgcattatta
cctgacacaggtaccccatttgctgcagaggattcggaagaagatgacagtttgattccc
agaaagaagagtagaattgttgaagattcagacgatgaagcaaatatagagagcgcttag
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