Lactuca sativa (garden lettuce): 111895477
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Entry
111895477 CDS
T05352
Name
(RefSeq) cyclic nucleotide-gated ion channel 4
KO
K05391
cyclic nucleotide gated channel, plant
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
111895477
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lsv04040
]
111895477
Ion channels [BR:
lsv04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
111895477
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GFIT
Motif
Pfam:
cNMP_binding
Ion_trans
Motif
Other DBs
NCBI-GeneID:
111895477
NCBI-ProteinID:
XP_023747324
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Position
9:complement(172024174..172043993)
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AA seq
663 aa
AA seq
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MATRHDFADAYSTDTSEEEQEEEDEEDVEEESKDCKELIPSTCPPRGRAFLDPRSEWVQE
WNRAFLLVCATGLFIDPLFFYTLSISEPCMCVFVDGWFAVTVTVLRCVTDALHVWNMWLQ
FKMSRWWRSPHHHRRLSHDDDIARNVAARIITKAKKSFVFDLFVILPIPQVVLWVVIPAL
LKKGSTTEIMTVSLIMFLFQYLPKIYHSVCLLRRMQNLSGYIFGTVWWGIALNLIAYFVA
SHAVGACWYLLGMQRAAKCLKEKCMEANGICVSRFLTCQNPVYYGTDKFVKDHTRLLWGS
NKEARTTCLENEDNSSYGAYKWTLQLVTNDSRLEKILFPIFWGLMTLSTFGNLESTTDWL
ECVFIIIVLTTGLLLVTMLIGNIKVFLHATTSKKQAMQLKMRNIEWWMRRRHLPQSFRQR
VRNYERQRWAAMRGVDECEMIRNLPEGLRRDIKYHLCLDLVRQVPLFQHMDNLVLENICD
RVKSLIFTKGETIAREGDPVQRMLFIVRGHLQSSQVLRDGVNSCCMLGPGNFSGDELLSW
CLRRPFIERLPPSSSTLITLETTEAFGLEADDVKYVTQHFRYTFVNEKVKRSARYYSPGW
RTWAAVAIQLAWRRYRHRLTLTSLSFIRPRRPLSRCSSLGEDRLRLYAALLTSPKPNQDD
FDF
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atggctaccagacatgattttgcagatgcatacagtacagataccagtgaggaagaacaa
gaagaagaagatgaagaagatgttgaagaggaatccaaagattgcaaagagctcattcct
agcacgtgcccaccacgtgggagggcgtttctggacccaagatccgaatgggttcaagaa
tggaaccgggcgttccttctggtttgcgccaccggtctgttcattgacccgctgtttttc
tacacactctccataagtgaaccatgcatgtgtgtgttcgtcgacgggtggttcgccgtc
acagtcacggttctccggtgtgttacggacgccttgcacgtgtggaacatgtggttgcag
ttcaagatgagcaggtggtggagatcgccgcaccaccaccgtcgattaagccatgacgat
gacattgcacgtaacgtcgccgctcggatcataaccaaggccaagaaaagcttcgttttt
gatctcttcgtaatcctcccaataccccaggtggttttatgggtagtgattcctgcattg
ttaaagaagggttcgacgacagaaataatgacagtttctttaatcatgttcttgtttcaa
tacttaccaaagatttatcactctgtatgccttttgcgacgtatgcaaaatctctcaggc
tacatttttggtactgtttggtgggggatcgctctcaatttgatcgcttatttcgttgcc
tctcatgcagtaggagcatgttggtacttgcttggtatgcaaagggctgcgaaatgcttg
aaagaaaaatgcatggaagcaaacgggatttgtgtctcaagatttttgacatgtcaaaac
cctgtttattatggcacagataagttcgtgaaagatcatacaaggctcttgtggggatca
aataaagaggcaagaacaacttgtcttgaaaacgaagacaattctagctatggagcttat
aaatggactcttcaactcgttaccaatgatagccgtttggaaaagatacttttccccatt
ttttggggactcatgacccttagtacgttcgggaatttagagagcacaaccgattggttg
gaatgcgttttcatcatcatcgttctcacaacagggcttcttctagtcaccatgttgatt
ggaaatatcaaggtgtttttacatgcaacaacatcaaagaaacaagctatgcaattgaaa
atgagaaatatagagtggtggatgaggagaaggcacctccctcagagtttccgacaaaga
gtacgtaattatgagcgccaacgatgggcagcaatgcgtggtgtggacgaatgtgagatg
atacgcaatctccctgagggtctcaggagagatattaagtatcatctttgcttggacttg
gtccgacaagtaccattatttcaacatatggataacttggtccttgagaatatatgcgat
cgtgtcaagtccctcatttttaccaagggagaaacgattgcaagagaaggagaccctgta
cagagaatgttgttcatagtaagaggtcatcttcaaagtagccaagtactccgagatggt
gtcaacagttgttgcatgttaggccctggaaactttagcggcgatgagctcttatcatgg
tgtctccgacggcccttcatcgagagactaccaccatcatcatcaacgctcatcactctt
gaaacaactgaagcttttgggctagaagctgatgatgtcaagtatgtaacgcaacatttc
aggtatacattcgtgaatgaaaaggtgaagaggagtgctcggtattattctccagggtgg
aggacttgggctgcggtggcgattcaattggcatggcggaggtaccgacatagactcact
ttgacgtcgttatctttcattaggccgagaagaccattgtcgaggtgttcttcacttggg
gaagatcggttgaggctttacgccgctttgttgacttcgcctaaaccaaatcaggatgat
tttgacttttga
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