Lactuca sativa (garden lettuce): 111895936
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Entry
111895936 CDS
T05352
Name
(RefSeq) methionine--tRNA ligase, cytoplasmic
KO
K01874
methionyl-tRNA synthetase [EC:
6.1.1.10
]
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv00450
Selenocompound metabolism
lsv00970
Aminoacyl-tRNA biosynthesis
lsv01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
111895936
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
111895936
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
lsv01007
]
111895936
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lsv03016
]
111895936
Enzymes [BR:
lsv01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.10 methionine---tRNA ligase
111895936
Amino acid related enzymes [BR:
lsv01007
]
Aminoacyl-tRNA synthetase
Class I (U)
111895936
Transfer RNA biogenesis [BR:
lsv03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
111895936
Prokaryotic type
Other AARSs
111895936
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1g
Anticodon_3
tRNA-synt_1
tRNA-synt_1e
Motif
Other DBs
NCBI-GeneID:
111895936
NCBI-ProteinID:
XP_023747762
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All DBs
Position
6:complement(94552454..94556208)
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AA seq
604 aa
AA seq
DB search
MGDILAGDGEVPKLPIPGKRNILITSALPYVNNVPHLGNIIGCVLSADVFARYCRLRGYN
AIYICGTDEYGTATETKALQENCTPKEICDRYHAIHRDVYNWFNISFDEFGRTSTPQQTE
VCQAIFKKLMENKCLSENTMQQLYCDICQKFLADRLVEGTCPNKTCNYDSARGDQCESCS
KLLNPTELINPRCKVCVSSPCIRDTNHLFLELPLLEGKLEEYIKKMSVSGSWSQNAIQAT
NAWLKTGLKQRCITRDLKWGVPVPHERFNDKVFYVWFDAPIGYVSITSCYTPEWEKWWKN
PENVELYQFMGKDNVPFHTVMFPSTLLGTSENWTLMKTISVTEYLNYEGGKFSKSKGVGV
FGNDAQDTNIPVEVWRYYLLTNRPEVSDTLFTWTDLQAKLNTELLNNLGNFINRVLSFIA
KDPDSRAGRGSGYNSIIPDAPGAEKHLLSKTLGDKIGTYVEQYVEAMEKVKLKQGLKIAM
SISGEGNAYLQESKFWRLYREDLPSCSIVMKTSVGVVYLLACLLEPFMPSFSIQVLKQLS
LPHQLSLCDEKGDVEKAKRPWEMIPSGHRIGTPVPLFRELRDEEVELLRERFAGSQADRA
DRQT
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atgggggatatattggccggcgacggcgaggtaccgaagcttccgattcccggcaaacga
aacatactaattaccagtgctcttccttacgtcaacaacgttcctcaccttgggaatatc
atcggctgtgtgttgagtgccgatgtgtttgctcgatattgtcgactgagggggtataac
gctatatacatttgcggaactgatgaatatggaacagcaactgagaccaaagctttgcaa
gaaaattgcacccccaaagaaatatgcgatagatatcatgcgattcacagggatgtctat
aattggtttaacataagttttgatgaatttggacgaacttcaaccccacaacaaaccgaa
gtttgtcaagcaatctttaaaaagttaatggagaacaaatgcctttctgagaacacaatg
cagcagctttactgcgatatatgtcagaaatttttagctgaccgacttgttgaaggtacc
tgccctaacaaaacatgcaattatgactctgcccgaggagatcaatgtgaaagttgcagt
aaactgttgaatccaacagaactcattaatccaagatgcaaggtctgtgtatccagtcct
tgtatccgtgacacaaatcacttgtttcttgagcttccattgttggagggtaaacttgaa
gagtacatcaaaaaaatgtcagtgtctggatcatggagtcagaatgctattcaagcaaca
aatgcatggcttaaaacaggattaaagcaacgatgtattactagggatttgaagtggggg
gttcctgttcctcatgagagattcaatgacaaagttttctatgtttggtttgatgcacca
attgggtatgtctcaatcacttcatgttacacacctgagtgggagaagtggtggaagaat
cctgaaaatgtggagttgtatcagtttatgggaaaagataatgtaccctttcatactgta
atgttcccttctacacttcttggaacttctgagaactggactttgatgaagactatcagt
gttacagagtatctaaactatgaaggaggtaagttttcaaagagcaagggtgtaggagtc
tttggtaatgatgcacaggatacaaatattccagtagaagtgtggcgatactatctgcta
actaatagaccagaggtatcagacacattattcacatggacagatcttcaagcaaaactc
aacaccgagttgctgaataatttaggcaatttcattaaccgtgtcttgagcttcattgct
aaagatccagattcaagagctggtagaggttcaggatacaattccataattcctgatgct
ccaggtgctgagaaacatctcttatcaaagacactaggagacaaaattggtacttatgtt
gaacaatatgttgaggccatggagaaggttaagctaaagcaaggattgaaaattgcaatg
agtatatctggtgagggcaacgcgtatctacaagaaagtaaattctggaggctttacaga
gaagacctaccttcatgttccatagtcatgaaaacttcagtgggagtagtttatcttctt
gcttgcctgttagagccttttatgccatcattttccatccaggtactgaagcagctttct
ttgccccaccaactttccctgtgtgatgagaaaggagatgtagagaaggccaaaagacca
tgggagatgataccttctggccacagaattgggacccctgtgccattatttagagaactg
agagatgaagaggtggagttgttgagggaaaggtttgctggaagtcaagctgatagagca
gataggcaaacataa
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