Lactuca sativa (garden lettuce): 111896018
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Entry
111896018 CDS
T05352
Name
(RefSeq) transcription initiation factor TFIID subunit 11
KO
K03135
transcription initiation factor TFIID subunit 11
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
111896018
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lsv03021
]
111896018
Transcription machinery [BR:
lsv03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
111896018
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAFII28
T3SS_basalb_I
Crust_neuro_H
Motif
Other DBs
NCBI-GeneID:
111896018
NCBI-ProteinID:
XP_023747818
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All DBs
Position
4:complement(70191991..70193723)
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AA seq
212 aa
AA seq
DB search
MKQSKDPFEVAFEELDESLPDSPDTHDEIMAQTLSSKPNINSQRDDLENSIHPLNQPKSR
VRLASTSAAIPTNQKNKEDDEEEEEENMDVELGKFPSTGDPDKMAKMQSILSQFTEEQMS
RYESFRRSGFQKSNMKRLLASITGSAKISMPMTIVVSGIAKIFVGELVETARVVMTERKE
TGPIRPCHIREAYRRLKLEGKIPKRSVPRLFR
NT seq
639 nt
NT seq
+upstream
nt +downstream
nt
atgaagcaatcaaaagatccatttgaagtagcgtttgaggaactagatgaatcccttcct
gattcccccgacactcatgatgagattatggctcaaactttatcatcaaaaccaaatatc
aactcgcaaagagatgatttggaaaacagtattcatcctttaaaccaaccaaaatcaaga
gtcagattggcctcaacttcagcagccatcccaaccaatcagaagaacaaagaagatgat
gaggaagaagaagaggaaaacatggatgttgaacttggaaaattcccatctacaggagac
cccgacaaaatggccaagatgcaatcaatattatctcagttcactgaggaacaaatgagt
aggtatgaatctttcagaagatctggatttcagaaatcaaacatgaagaggttattagcc
agcattactggaagtgccaagatttcaatgccaatgactattgtcgtatccgggatagca
aagatttttgttggtgaacttgttgagacagcgagggtagtgatgacagagagaaaggag
acggggccaataaggccgtgtcacattcgggaagcgtacagaaggttaaaacttgaagga
aagattccaaaaagatcggtgccaaggctttttcgttag
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